Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE2374
Help
Entry
YE2374 CDS
T00469
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yen03016
]
YE2374 (rnd)
Enzymes [BR:
yen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
YE2374 (rnd)
Transfer RNA biogenesis [BR:
yen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
YE2374 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAL12426
UniProt:
A1JRC4
LinkDB
All DBs
Position
complement(2560426..2561547)
Genome browser
AA seq
373 aa
AA seq
DB search
MNYQLITTDSALQQVCEQARTHAHVALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
TQWQPFRELLQDLNVVKYLHAGSEDLEVFLNAFELMPTPMIDTQVLAAFSGRSLSCGFAM
LVNEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLATKLVEATEAAGRMDAAK
DECELLCRRRSETLDPELAYREITNAWQLRGYQLACLQKLASWRLRQARERDLAVNFVVR
EENLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPVINLIDQ
PGYKKVFKDIKALIVSVSERSGLSSELLASRRQINQLLSWHWKLKSTETQPELLSGWRGD
LLATELTEILQQY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacgaccgacagtgcgttgcagcaggtctgcgaacaagcccga
acacatgcccatgttgcgttggatacagagtttgtcagaacccgcacctactaccctcag
ttgggcctgattcaactgtatgatggtgaacaactttcgctgattgatcctttgcccatc
acgcagtggcagcctttccgtgagttgttgcaagatttaaatgtagtgaagtacctacat
gccgggagtgaagatctcgaagtgttcttgaatgcttttgaactcatgcctacaccgatg
attgatactcaggtgttggcggcattttctggccgttcgttatcttgcggtttcgctatg
ttggtgaatgaatttgaaggcgtcgaattagataaaagcgaatctcgcacggattggatt
gctcgtccgctgagtgaaaagcagtgtgattatgcggctgctgacgtattttacctgtta
ccgttagcgactaaattagttgaagcgaccgaagcagcggggcgtatggatgccgctaaa
gacgaatgtgagctgttgtgtcgccgtcgcagtgaaacactcgatcccgaattagcctac
cgtgaaatcaccaatgcctggcagttgcgcggctatcagttggcttgcctacaaaagttg
gcgtcatggcgcttacgtcaggctcgtgaacgagacctggcggtgaactttgtggttcgc
gaagagaatctgtggcaagttgcccgttatcagccaacctcgctgggtgagcttgactct
ctgggcttaagtgggcaagagatccgctatcatggccgcaccttgctggcgttggtagcg
gaaggtaatgctgttcctgaggatcagttgccaccaccggttatcaatctgattgatcag
ccaggttacaaaaaagtctttaaagatattaaagcacttattgtgtcggtcagtgagcgc
agtgggctaagtagcgaattgttggcgtcacgccgccaaataaaccaattactcagttgg
cattggaaattgaagtcaacagaaactcaacctgaattattaagtggttggcgtggggat
ttattggctacggaattgactgagattttacagcaatattaa
DBGET
integrated database retrieval system
