Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE2889
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Entry
YE2889 CDS
T00469
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YE2889 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yen03019
]
YE2889 (rhlE)
Enzymes [BR:
yen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YE2889 (rhlE)
Messenger RNA biogenesis [BR:
yen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YE2889 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
Shikimate_DH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL12927
UniProt:
A1JSL5
LinkDB
All DBs
Position
complement(3140549..3141904)
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AA seq
451 aa
AA seq
DB search
MSFDSLGLNADILRAVEEQGYLVPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSQDQQPIKGRRPVRALILTPTRELAAQIDENVQSYSKYLKLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKRELLSQMI
GEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALDGYEPDPSIKADPIQNGRQGRGAQRPGMGRGSSASRPQNGGAAAGRG
DSRTSRPRSQADGQRRPAGPSSRGRSRKPGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggtttaaacgccgacatcctgcgtgctgttgaagagcagggc
taccttgtgccgacgccaattcaacgtcaggcaatccctgtggtactggaaggccgtgat
ttaatggccagcgcacaaaccggtaccggtaaaaccgctggtttcaccttgccattgttg
caactgctgagtcaggaccaacagcccattaaaggccgtcgcccggtgcgcgcgttgatt
ttgacgccgactcgcgaactggctgcgcagattgacgaaaacgtccagagttacagcaaa
tacctgaagctgcgttcgctggtggtatttggtggcgttagcattaacccacagatgatg
aaattgcgtggtggtgttgatattttggtcgccaccccgggccgtttactggatctggaa
catcagaacgctgttgatttgtccaagattgagattttggtgctggacgaagccgaccgc
atgctggatatgggctttatccacgatatccgccgtgttttggcaaaactgccagccaag
cgtcagaacttgctgttctccgccaccttctctgatgagattaaaggtttggctagcaag
ctgttgcataaccccgcttctgttgaagtggcgcgtcgcaacacagcttctgaacaaatt
gcacaaagcgttcattttgtggacaaaaaccgcaagcgcgagctgttgtctcagatgatt
ggcgaaggtaactggcagcaagtattggtgttcaatcgcaccaaacatggcgctaaccat
ttggctgaacaattgaataaagacggcattactgccgccgctattcacggtaacaagagt
cagggcgcgcgtactcgtgcattggctgattttaaagatggcaaaatccgtgtactggtc
gcgactgatatcgccgctcgcggtttggatattgatcagttacctcatgtggttaactat
gaactgccaaacgtaccggaagattacgtgcaccgcattggccggactggccgcgcggaa
cgtactggtgaagcgatttctttagtttgtgttgatgaacataaactgttgcgtgatatc
gagcgcttactgaaacgtgaaatcccacgcattgcgctggatggctatgagccggaccca
agcattaaagctgatccgattcaaaatggccgtcaaggtcgcggagcacaacgtcctggt
atggggcgtggtagcagtgccagccgcccacaaaatggtggcgcagcagcaggccgtggc
gatagccgcaccagccgcccacgtagccaggctgatggtcaacgccgcccggcaggcccg
tcttcacgtggccgtagccgcaaaccaggtgaataa
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