Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YEP0013
Help
Entry
YEP0013 CDS
T00469
Symbol
yopB
Name
(GenBank) virulence plasmid YopB transmembrane effector protein
KO
K23475
transloator
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
YEP0013 (yopB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yen02000
]
YEP0013 (yopB)
Transporters [BR:
yen02000
]
Other transporters
Pores ion channels [TC:
1
]
YEP0013 (yopB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
DUF2207_C
DUF677
DUF8108_M
DUF6040
DUF6279
Cep57_MT_bd
CENP-K
Motif
Other DBs
NCBI-ProteinID:
CAL10037
UniProt:
A1JU71
LinkDB
All DBs
Position
pYVe8081:complement(10593..11798)
Genome browser
AA seq
401 aa
AA seq
DB search
MSALITHDRSTPVTGSLLPYVETPAPAPLQTQQVAGELKDKNGGVSSQGVQLPAPLAVVA
SQVTEGQQQEITKLLESVTRGTAGSQLISNYVSVLTNFTLASPDTFEIELGKLVSNLEEV
RKDIKIADIQRLHEQNMKKIEENQEKIKETEENAKQVKKSGMASKIFGWLSAIASVVIGA
IMVASGVGAVAGAMMIASGVIGMANMAVKQAAEDGLISQEAMQVLGPILTAIEVALTVVS
TVMTFGGSALKCLADIGAKLGANTASLAAKGAEFSAKVAQISTGISNTVGNAVTKLGGSF
GSLTMSHVIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKADMAALQSIID
RLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAGRPHTV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgttgataacccatgatcgctcaacgccagtaactggaagtctacttccctac
gtcgagacaccagcgcccgccccccttcagactcaacaagtcgcgggagaactgaaggat
aaaaatggtggggtgagttctcagggcgtacagctccctgcaccactagcagtggttgcc
agccaagtcactgaaggacaacagcaagaaatcactaaattattggagtcggtcacccgc
ggcacggcaggatctcaactgatatcaaattatgtttcagtgctaacgaattttacgctc
gcttcacctgatacatttgagattgagttaggtaagctagtttctaatttagaagaagta
cgcaaagacataaaaatcgctgatattcagcgtcttcatgaacaaaacatgaagaaaatt
gaagagaatcaagagaaaatcaaagaaacagaagagaatgccaagcaagtcaagaaatcc
ggcatggcatcaaagatttttggctggctcagcgccatagcctcagtggttatcggtgcc
atcatggtggcctcaggggtaggagccgttgccggtgcaatgatgattgcctcaggcgta
attgggatggcgaatatggctgtgaaacaagcggcggaagatggcctgatatcccaagag
gcaatgcaagtattagggccgatactcactgcgattgaagtcgcattgactgtagtttca
accgtaatgacctttggcggttcggcactaaaatgcctggctgatattggcgcaaaactc
ggtgctaacaccgcaagtcttgctgctaaaggagccgagttttcggccaaagttgcccaa
atttcgacaggcatatcaaacactgtcgggaatgcagtgactaaattagggggcagtttt
ggtagtttaacaatgagccatgtaatccgtacaggatcacaggcaacacaagtcgccgtt
ggtgtgggcagcggaataactcagaccatcaataataaaaaacaagctgatttacaacat
aataacgctgatttggccttgaacaaggcagacatggcagcgttacaaagtattattgac
cgactcaaagaagagttatcccatttgtcagagtcacatcaacaagtgatggaactgatt
ttccagatgattaatgcaaaaggtgacatgctgcataatttggccggcagaccccatact
gtttaa
DBGET
integrated database retrieval system
