Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0023
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Entry
YE105_C0023 CDS
T01480
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03030
DNA replication
yep03410
Base excision repair
yep03420
Nucleotide excision repair
yep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YE105_C0023
03410 Base excision repair
YE105_C0023
03420 Nucleotide excision repair
YE105_C0023
03440 Homologous recombination
YE105_C0023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yep03032
]
YE105_C0023
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C0023
Enzymes [BR:
yep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YE105_C0023
DNA replication proteins [BR:
yep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YE105_C0023
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YE105_C0023
NER (nucleotide excision repair)
GGR (global genome repair) factors
YE105_C0023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
DUF2529
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADZ40521
LinkDB
All DBs
Position
28351..31149
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSKGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDSLFSNLDKIPTLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDITCDELNVSAPDDEQLHQLFSRYEFKRWLADVEAGKWLDGK
KDRPTAQASNKAFAAPESAPVAEVTAVLSQENYQTILDEKSLSDWIERLKKAEVFAFDTE
TDGLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPAQLDRDWVLAQLKPLLEDDKALKV
GQNLKFDQSMLARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEIPLLPIL
SRIERTGVLIDQNILVAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQVILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPEGYRIMAADYSQIELRIMAHL
SQDKGLLAAFAAGKDIHRATAAEVFGLSLEKVTNEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNATRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQQPEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGYNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattaatcctcgtagacggttcctcttacctctatcgt
gcttaccatgcttttccgccgctaaccaacagcaaaggcgagccaacgggcgcgatgtat
ggcgtgttgaacatgttgcgcagcctgttgctgcaataccgaccaagccatgtcgccgta
gtttttgatgccaagggtaaaacatttcgtgacgagcttttcgcggaatataagtctcac
cgcccacccatgcccgatgatttgcgggctcaaattgagcctcttcaccaaatggttaag
gctatggggctacctttattggttgtttccggtgttgaggctgacgatgttattggtact
ttggcacaagaggctgaaaaagcaggtcatgccgtattaattagtaccggtgataaagat
atggcgcaattagttacgccaaatatcactcttattaatacaatgaataacgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttccccctgaactgattattgattttctc
gctctgatgggtgactcctccgataatattccgggagttccaggtgttggtgagaaaacg
gcacaggctttattgcaaggtctgggtggattggactcactatttagtaatttggataag
atacccacactgacattccgtggtgcaaaaacgatgtctgccaaattggagcagaataaa
gatgttgcttatctctcttataaattagccacgattaaaacggatgttgaactggatata
acttgtgatgagttgaacgtctcagcgccggatgatgagcaattacatcaattattcagt
cgttatgagtttaagcgctggcttgcggatgtagaggctggcaaatggctggatggtaaa
aaagataggccaacagcgcaggcaagcaataaagcttttgcagcaccagagtctgcacct
gtggctgaagtgaccgctgtgctctcacaagaaaattatcagactatcttggatgaaaaa
tctttaagcgactggattgagcggcttaaaaaggcagaggtttttgcttttgatactgaa
actgacggccttgataccctcagcagtaatttaattggcctctcttttgcagtggcaccg
ggtgaagcagcttacctgccattagcacatgattatttggatgcccctgctcagcttgat
agggattgggttctggcccagcttaaacccttgctagaagatgataaggcactgaaagtt
ggtcagaatcttaagtttgaccaaagcatgttggcacgttatggcattgatctgcgtggt
attgcttttgataccatgttggaatcttatgttttagacagtgttgccggcagacatgat
atggatagcttagcggagcgctatctcaaccataagactattactttcgaagagatcgcc
ggtaaaggtaaaaaccaacttaccttcaaccaaattgcgttagagcaagctgggccttat
gcggcagaagatgcagacgttacactacagttgcacttggtgttgtggccgaagttacag
caaagtgaaggactcaaacgggtattccaagaaattgagataccgttactgccaattttg
tcccgtatcgagcggacaggtgtattgattgaccagaatatattggtggcgcattccaaa
gaactgactattcgtcttgatgagctggaaaaacaagcgcatgaattggctgaagagcct
tttaatctcgcctcgccaaagcaattacaggttattttgtatgaaaaacaaaaactacct
atcttgaagaaaacccctggcggcgcggcttcaactaacgaagaggtactggccgagttg
gcgctggattatcctctgccgaaggttattcttgagtatcggggcttagcgaagctgaaa
agtacctataccgataaactgccgttgatgattaatccggtttcagggcgagttcatacc
tcttatcatcaggctgtaactgccaccgggcgtttatcttcccgtgatcctaacttgcaa
aacattccggtgcgaaatgaagaggggcgtcgtattcgtcaggccttcattgcgccagaa
ggctaccgcatcatggcagctgactactcccagattgagctgcgtatcatggctcatttg
tcgcaggataaagggttattggcagcatttgctgctggtaaggatatccaccgcgcgact
gcggctgaagtctttggcttatcactggaaaaagtcacaaacgagcaacgccgcagtgcg
aaagccatcaactttggtttgatttatggtatgagtgcatttggtttggcgcgacagctg
aatattcctcgtggggaagctcagcgctatatggatctctattttgagcgctatcctggt
gtgttggaatatatggagcgcacccgcaaacaagccgccgaacaaggttatgtcacgact
ctggatggccgtcgcctctatttacctgatattcactcacgtaatgctactcgtcgcaaa
gccgcagaacgtgaagctatcaatgcgccgatgcaagggacggcagctgatattattaag
cgcgcaatgattgccgtggatgcctggttacagcaacaacctgagcctttggtgcgggtc
atcatgcaagtacacgatgaattagtatttgaagtgcatgaaagtgtattggaaagcgcc
gaacagaagatccgcgaactgatggaacaaagcatgcaactggctgtgccattaaaagtt
gatgtcggtgtgggttataactgggatcaagctcattag
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