Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0047
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Entry
YE105_C0047 CDS
T01480
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YE105_C0047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yep03021
]
YE105_C0047
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C0047
Enzymes [BR:
yep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YE105_C0047
Transcription machinery [BR:
yep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
YE105_C0047
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
YE105_C0047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
DUF1599
Motif
Other DBs
NCBI-ProteinID:
ADZ40545
LinkDB
All DBs
Position
complement(59360..59635)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQSGGKDALVPEENDKVTVIALREIEEGLIT
NQILDVRERQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgggcacgtcaaatccagtccggcggtaaagacgcactggttcca
gaagaaaacgataaagttactgtgattgcgctgcgtgaaatcgaagaaggcctgattact
aatcagattctcgatgtgcgtgaacgccaagaacagcaagagcaggaagccgcagagatc
caagcggtaaccgctattgctgaaggtcgtcgttaa
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