Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0110
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Entry
YE105_C0110 CDS
T01480
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YE105_C0110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C0110
Enzymes [BR:
yep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YE105_C0110
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YE105_C0110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
AAA_19
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADZ40608
LinkDB
All DBs
Position
complement(128775..130973)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVVQVALPVPLARTFDYRLDSAMGCPVVGARVSVPFGKRNAIGIVVGISETSTFPLEQL
KAIDAVLDGDSLFPPSLWRILCWATEYYHYPIGEVLFHALPILLRQGKPAQSAPLWQWFA
TEQGRATPPKSLKRAPKQQQALAALLQKPVYRHQVNEMALTESALQALRSKGLIDLRAQE
VATTDWCDGFSVLGERLRLNTEQATAVGAIRSEDTQFAAWLLAGVTGSGKTEVYLSVLEN
ILAQGRQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLRARNGEAAIV
IGTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEGIPIVMGTATPA
LETLHNVQMGKYRQLTLSKRAGNAKPAVQHLLDLKGLPLKVGLSQPLLKRIKAHLQADNQ
VILFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNYRQLRCHHCDSQRPVPQQCPKCG
STHLVSVGVGTEQLENELAPLFPDTPITRIDRDTTSRKGSLEQHLADVHQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHH
PEHPLLQILLQQGYDAFAKQALAERKSVFLPPYTSHIIVRSEDHDNQQSALFLQQLRNLL
ETSPLKDDALWIMGPVPALQAKRGGRFRWQLLLQHPSRQLLQRLIKTSQPLINTLPQARK
VKWTLDVDPIDS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttcaagtggcgttacccgttccgctggcccgtacctttgactaccgcctt
gacagtgccatgggctgcccggtagtgggtgctcgcgtcagtgtgccatttggtaaacgt
aatgccattggaattgtagtgggtatcagcgagaccagtacatttccccttgaacaactc
aaagctattgatgcggtgctggacggtgacagcttattcccacccagcctgtggcgcatt
ctttgttgggcaaccgagtactatcattatccgataggcgaagtgctgttccacgcgttg
cccattttattgcgccaggggaagcctgcgcaatccgcccccttgtggcaatggtttgcc
accgaacagggccgcgccacgccgccaaaaagcttaaaacgcgcgccgaagcaacaacaa
gcccttgcggcgttattacaaaagccggtttatcgccatcaagttaatgaaatggcatta
acagaaagtgcgctgcaagcattgcggagcaaagggttgattgacctgcgagcacaagaa
gtggcaaccactgactggtgcgacggtttttccgtgttgggcgaacgtttgcggctcaat
accgagcaagccaccgccgtcggggcgattcgcagtgaagatactcagtttgccgcctgg
ttgctggccggagtgactggctccggtaaaaccgaagtttatctcagtgtgctggaaaat
attctggcgcagggccgtcaggcgctggttttggttcctgaaattggcctaacaccgcaa
actatcgcccgttttcgcgagcgcttcaatgcgccagttgaagtgctccattccggttta
aacgacagcgagcgcttatccgtctggctacgagcgcgtaacggcgaagccgccattgta
atagggactcgctccgcgctgttcacgccattctcccgtctcggcgtcatcattattgat
gaagagcatgatagctcctataaacagcaagaaggctggcgttaccatgcccgcgattta
gcggtattccgtgcgcgcgaagaaggtattcccatcgtgatggggacggcaacccccgcg
ctggaaaccttacataatgtgcaaatgggtaaatatcgccagttaacgctatcgaaacgg
gcaggtaatgccaaaccggcagtgcagcacttgttagatctcaaagggttgccgctcaaa
gtcggcctttctcaaccgctactaaaacgtataaaggcccatttgcaggccgataatcag
gtgattctgttcctcaaccgccggggttatgcaccagcactgctgtgccatgagtgtggc
tggatagcagaatgtcagcgctgtgaccactattacaccctgcatcagaattaccgccaa
ttgcgctgccaccactgcgacagccagcgcccagtgccacagcaatgccctaaatgtggc
tcaacacatctggtgtcagtcggcgtcggtaccgaacagttggaaaatgagctggctcct
ctgttcccagacacgccgatcacccgaattgaccgtgataccaccagccgcaaaggctcg
ctggaacagcatctggctgatgtgcatcaaggaggggcgcggatattgattggcacccaa
atgctggcgaaaggccatcacttccccgatgtgactctggtggcattgctggatgtcgac
ggtgcattattctcggcagatttccgttcagcggagcgctttgcgcagctctacacgcaa
gtatcaggccgtgctggccgtgcgggtaaacaaggcgaggtcatcttacaaacccatcac
cctgagcatccattgctgcaaatcctactgcaacagggctacgatgcctttgccaaacaa
gcactggccgagcgcaaaagtgtatttttaccgccttataccagccatatcatcgtgcgc
agcgaagaccacgataaccagcaatcggcactgtttttgcaacaattacgtaatttactg
gaaaccagcccactgaaagatgatgcattatggattatggggccggttcctgcactacag
gcgaaacgaggtgggcgcttccgctggcaattattgttacagcacccctcgcggcaatta
ctgcaacgactgattaaaacatctcagccgctgatcaatactttgccgcaagcgcggaaa
gttaagtggacattagacgttgatcccatagacagctaa
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