Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0192
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Entry
YE105_C0192 CDS
T01480
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00300
Lysine biosynthesis
yep00470
D-Amino acid metabolism
yep01100
Metabolic pathways
yep01110
Biosynthesis of secondary metabolites
yep01120
Microbial metabolism in diverse environments
yep01230
Biosynthesis of amino acids
Module
yep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YE105_C0192
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YE105_C0192
Enzymes [BR:
yep01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YE105_C0192
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ADZ40690
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Position
240571..241395
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDELVCVNMGE
PNFEPQSVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE
SHERFPERANIGFMQVVSREHIRLRVYERGAGETQACGSGACAAVAIGIQQELLGEEVHV
ELPGGSLHISWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtcttggcaacgactttatggttgtcgatgcagttacc
caaaatgtttacttttcgccggagttgatccgccgattagcagaccggcacactggcgtg
ggctttgatcaaatgttggtggttgagccaccttatgatcctgagctggattttcactac
cgtatttttaatgccgatggcagcgaagtctctcagtgtggcaatggcgcgcgctgtttt
gcccgttttgtccgactgaaagggctgaccaataaacgtgatatcagtgtcagcactcaa
accggtcgtatgatattgagtgtgactgaagacgaactggtgtgcgtcaatatgggcgaa
cccaatttcgaaccgcaaagtgttcctttccgtgcggctaaagctgaaaaaacctacatt
ttgcgtgctgccgagcacaccgtgttatgtggtgtcgtttcgatgggcaatcctcattgt
gtgatgcaggttgatgatgtttcggttgccaatgttgccttgctaggcccagtattagaa
agtcatgagcgctttcccgaacgggctaatatcggctttatgcaggttgtgagccgtgaa
catatccgcttgcgggtgtatgagcgcggagccggtgaaactcaggcttgtggtagtggg
gcttgtgcggccgtggcgattggtattcagcaagaattgttgggtgaagaggtgcatgtt
gaattgccgggtggcagtttgcatatcagctggaaagggccgggtcacccgctgtatatg
accgggccggccacccatgtgtatgatggatttatccatctataa
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