Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0196
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Entry
YE105_C0196 CDS
T01480
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03420
Nucleotide excision repair
yep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YE105_C0196
03430 Mismatch repair
YE105_C0196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C0196
Enzymes [BR:
yep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YE105_C0196
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YE105_C0196
MMR (mismatch excision repair)
Other MMR factors
YE105_C0196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADZ40694
LinkDB
All DBs
Position
243963..246125
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAQGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETADMPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRRMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggccgcg
ccacgctgcaacctgttggtactggccggtgcgggcagtggtaaaacacgggtgctggtt
catcgtattgcctggctgttgtcggtagaaaatgcctccccgtattcgattatcgcggtg
acctttaccaataaagcggcggccgaaatgcgccaccgtattgagcatttgattggcacc
agtcagggcggcatgtggattggcactttccacgggttggcgcaccggttgttgcgtgct
caccatatggatgccaatctgccgcaagatttccaaatcctcgacagcgacgaccaactg
cggttattgaagcgcttggttaaggccctgaatttagatgaaaaacaatggccaccacgt
caggcaatgtggtacatcaacggcaaaaaagacgaaggtctacgtccgcagcatattgag
agctacggtaacccggttgaagccacttggttgcgtatttatcaggcctatcaggaagcc
tgtgaccgcgcgggcctggtggattttgccgagctattattgcgtgcacatgagctgtgg
ctaaataagccgcacattctgaatcactatcgcgagcgctttaccaacattctggtggat
gagttccaggataccaacaacattcaatatgcctggattcgcctgctggcgggggatcgc
tccaatgtgatgattgtcggtgacgatgaccagtcaatttatggttggcgcggggcgcag
gtggagaatatccagcgcttcctgaaagattttcccggcgctgaaaccatccgattggag
cagaattatcgttcgaccagcaatattctgacggcggcaaacaccctgattgctaataat
gacggccgcatgggtaagaacttgtggactgatggggcgcaaggcgagcctatctcgctc
tattgtgcttttaacgagttggatgaagcccggtttgtggttaatcgcatcaaagcctgg
caagacaacggcggcgcgctgaatgattgcgccatcttatatcgcagtaatgcccaatcg
cgtgttttggaagaggccttgttacaaacggcgatgccgtaccgtatttatggtggtcag
cgcttcttcgaacgtcaggaaatcaaagatgcactggcttatctgcgcctgatttccaat
cgtaacgatgatgctgcttttgagcgggtggtgaatacgccgactcgtgggattggtgat
cgcacattagatgtgattcgacaaaccgcgcgtgaccgtcagttaaccttatggcagtca
acccgtgccatgttgcaggaaaaagtgctggcaggacgtgcggcttctgcgctgcaacgt
tttgtcgaactggtggattcactggcgcatgaaaccgctgatatgccactgcatgtccaa
actgatcgcgtaattcgcgattctggtttgtggtcgatgtatgagcaggaaaagggcgaa
aaaggtcaggcgcgtgttgaaaaccttgaagaactggtcaatgcgacccgccaatacagc
tatcaggatgaagatcaggatctgatgccactacaggcatttctttctcatgcggcgctg
gaagccggtgaggggcaagcagatgcctatcaggatgcagtgcaactgatgactctccat
tcagcaaaagggttggagttcccgcaggtatttatcgtaggtatggaagagggcatgttc
ccaagtcagatgtcactggatgaaggcgggcgtctggaagaagaacggcggctggcctat
gttggggtcacccgcgcgatgcagaaactgacactctgttatgccgagagccgccgtttg
tacggcaaagaagtgaatcatcggccatcacgttttatcggcgaattgccgcaagagtgc
gtcgaagaagtgcggctacgcgcgacggtctctcgcccggtaaaccaccgtagaatgggg
acgccaatgaacgaaaatgacagtggcttctcactgggccagcgggtgcgacaccctaaa
tttggtgaaggcacgatagtcaatttggaaggcagcggtgagcacagtcgattgcaagta
gccttccccggtgaagggattaagtggttggtggcggcttatgccagactagaagccgtc
taa
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