Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0454
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Entry
YE105_C0454 CDS
T01480
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yep03021
]
YE105_C0454
03009 Ribosome biogenesis [BR:
yep03009
]
YE105_C0454
Transcription machinery [BR:
yep03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
YE105_C0454
Ribosome biogenesis [BR:
yep03009
]
Prokaryotic type
rRNA transcription factors
YE105_C0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ADZ40952
LinkDB
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Position
537411..538898
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AA seq
495 aa
AA seq
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MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIEVRVSIDRKTGDFDTFR
RWVAVDEVTMPTREITLEAAQYEDPSLQLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVEQFRQYLGEIVTGTVKKVNRDSIALDLGNNAEAVINREDMLPRENFRPGDRIR
GVLYDVRPEARGAQLFVSRSRPEMLIELFRIEVPEIGEELIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDVAVEASNLAQAIGRNGQNVRLAAQLSGWELNVMTADDLQAKHQAEAHAAIDTFT
KYLDIDEDFATVLVEEGFSSLEELAYVPMKELLEIDGLDEDTVEALRDRAKAALTTLALA
QEESLGDQKPADDLLNLAGLERSMAFKLAARGVCTLEDLAEQGIDDLADIEGLSDEQAGE
LIMAARNICWFGDNA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagattctggctgttgtagaagcagtttccaatgaaaaatcccttccgcgc
gagaagatttttgaggcgttggaaaccgctctagcgacagcgaccaagaaaaaatacgaa
caagaaattgaagttcgcgtcagcattgaccgtaaaactggtgatttcgacaccttccgt
cgttgggttgccgttgacgaagtcacgatgccaacccgcgaaattacgttagaagcggct
caatacgaagatccttcgctccagctgggcgattatgtagaagatcagattgaatctgtc
acttttgaccgcattacaacccaaacagccaagcaagttatcgtacaaaaagtacgtgaa
gctgagcgtgctatggttgttgaacaattccgccagtatttaggtgagattgtgaccggt
acggttaagaaagttaaccgtgacagtattgcactggatctgggtaataatgccgaagcg
gttattaaccgtgaagacatgttaccgcgtgaaaacttccgtccaggcgaccgtatccgt
ggtgttttgtacgatgtccgtccagaagcacgcggtgctcagctgtttgtcagccgttca
cgtcctgaaatgctgatcgagttgttccgcattgaagtgccagaaattggcgaagaattg
atcgaaattaaagctgcggcccgtgatcctggctcgcgtgctaaaattgcggtcaaaacc
aacgacaaacgtatcgatccagtcggtgcctgtgttggtatgcgtggtgcccgtgttcaa
gctgtatccagcgaacttggcggcgagcgcattgatattgtattgtgggatgataatcca
gcccagtttgttattaatgccatggcgccagctgatgttgcgtcaattgtggttgatgaa
gacaaacacacgatggatgttgccgttgaagccagtaacctggctcaggcaattggccgt
aatggtcagaacgtacgtttagcagcacagctgagtggctgggaactgaacgtaatgacg
gcggacgatcttcaggcgaagcatcaggccgaggctcatgccgctattgataccttcacc
aaatatcttgatatcgatgaggactttgccaccgttttggtagaggaaggtttctcttct
ctggaagagttggcttacgtgccaatgaaagagcttctggaaatcgatggtcttgacgaa
gatacggttgaagcgctgcgtgaccgcgccaaagctgcattgaccacgctggccctggca
caagaagaaagtcttggcgaccaaaaacccgctgatgacctgctgaacctggccggtctg
gaacgtagcatggcatttaaattggctgcgcgcggtgtgtgtacgctggaagatcttgcc
gagcagggtatcgacgatctggcagatattgaagggcttagtgatgagcaagccggcgag
ctgattatggccgcacgtaatatctgttggtttggcgataacgcgtaa
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