Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0457
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Entry
YE105_C0457 CDS
T01480
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yep03016
]
YE105_C0457
Enzymes [BR:
yep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YE105_C0457
Transfer RNA biogenesis [BR:
yep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YE105_C0457
Prokaryotic type
YE105_C0457
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADZ40955
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All DBs
Position
542078..543067
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AA seq
329 aa
AA seq
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MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVIQAQMDAALDSFRGSSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAIVETAQAEERSPNAELDAL
LLPMDSAVLNFPEVNLLPTVAAYVKQGQPVHVAGAPGEGMVRITEGEERNFIGIGTIAED
GRVAPKRLVVEHVDGANPVVAGVAAGNTP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacgtctctttagcgcaaaccgc
gcaggccataccggtgcactcgatccattggcgaccggtatgttacctatctgtttgggt
gaagcgaccaagttttcccaatttttgctcgattcagataagcgctatcgagtggttgcc
cgtttaggtcaacgcacggatacctcagatgccgaaggcgcattaatcagcgagcgtgaa
gttaatgtcatacaggcacagatggatgccgcgttggacagtttccgtggtagtagccag
caggtgccatccatgtattctgcgctgaagcatcaaggcaaaccgctgtatgaatatgct
cgccaagggattgaagttgagcgtgaagcgcgcagtattactgtgtatgaactgctgttt
atccgctgggaaggtaatgacctggaactggaaatccactgttccaaaggcacttatatt
cgtaccattattgatgatttaggtgaattactggggtgcggcgcacatgtgagttatctg
cgtcggttgcaagttgcgacttatccaagtgaccgcatggtgacgttggaacagttgacg
gcaatcgttgaaacagcgcaagcagaagagcggtcgccaaatgctgaactggatgcgttg
ctattaccgatggatagtgcggtattaaacttccctgaagtcaatctgttacctactgtt
gcggcctatgtgaaacaagggcaaccagtacatgtagcgggagctcctggtgaaggaatg
gtccgtatcactgaaggtgaagagcgtaatttcattggtattggcacgattgctgaagat
ggccgcgttgctccgaaacgcttggttgtagaacatgtggatggtgcaaaccctgttgta
gcaggtgtagcggcaggaaacacaccgtag
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