Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0739
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Entry
YE105_C0739 CDS
T01480
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yep03016
]
YE105_C0739
Enzymes [BR:
yep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
YE105_C0739
Transfer RNA biogenesis [BR:
yep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YE105_C0739
Prokaryotic type
YE105_C0739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADZ41235
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All DBs
Position
complement(878403..879452)
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AA seq
349 aa
AA seq
DB search
MDMDNLTWLHGKPKASGVLKANPEDFVVVEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LARFAKIHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLSTFELEGCEVLESVRQKRKL
RIGSLKGNAFTLVLRHITGSQDVEQRLQQIAAHGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSDRLAQQQATTVLEGDALQLSGRGSWFVAATDEL
ALLQQRVDVGELNITAPLPGDGELGTQGAALVFEQACLADQTELLALIKRERVEGTRRAI
LLKPQNMAWNWWDEVTLELSFWLPAGSFATSVVREIMNQDNADAADIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatatggacaatctaacctggttgcacggcaagcccaaggcgagtggcgttttaaaa
gccaacccggaagattttgtggtagtggaagatctgggttttgagccggacggtgaaggt
gagcatttattggttcgtatccgcaaaaatggctgtaacacccaatttgttgctgattat
ctggcgcgtttcgccaaaattcacccacggctggtgagctatgcgggcttgaaagatcgt
cacgctgtcaccgagcagtggttttgtctgcacttgccgggtaaagaagcgccggatctt
tcgactttcgagctggaaggttgtgaagtgctggagtctgtgcggcagaaacgaaagtta
cgtatcggttcattgaaaggcaatgcttttaccttggtattgcgccacataacaggtagt
caggatgtagaacaacgcttgcaacagatagccgctcatggtgtacctaactattttggt
agccagagatttggccgtggtggcaataatctggtgcaggctcgcttgtgggcgaataat
gaaattcgggtgaaagagcgcagtaaacgcagcttttacttatccgccagccgtagcgcc
atgttcaacctgattagcagtgaccgtttggctcaacagcaggcgacgacggtgctggaa
ggggatgcattacagctctcggggcgcggcagttggtttgttgccgcaactgatgagttg
gccttgttacagcagcgagtcgatgtgggcgaactgaatattacagcgccattgcccggt
gatggtgagctgggcactcaaggcgcagcattagttttcgagcaggcatgtttagcggat
caaaccgagttactggcgctgattaaacgcgaacgtgttgaagggacacgccgggccatt
ttgctgaaaccgcagaatatggcatggaactggtgggatgaggtcacgttggaactcagc
ttctggttacccgccggtagttttgctaccagtgtagtgcgcgaaatcatgaatcaggat
aatgccgatgctgcggatattgctgagtaa
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