Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0858
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Entry
YE105_C0858 CDS
T01480
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yep03009
]
YE105_C0858
Enzymes [BR:
yep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
YE105_C0858
Ribosome biogenesis [BR:
yep03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YE105_C0858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
RrnaAD
PCMT
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
Methyltr_RsmB-F
DHDPS
FtsJ
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ADZ41354
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Position
1017626..1018903
Genome browser
AA seq
425 aa
AA seq
DB search
MTVNSLDPFGQGVAHHQGKAIFIPGALPGEQAEIELTEQKRQYSRGKLKRLLNRCNERVV
PACPHFGICGGCQQQHANSQLQQMSKADSLQRLIMREAGACPQLDPVICGSEYGYRRRAR
LGLLYQPKQHRLQMGFRQTESHDLVCIKHCPVLRPELERLLLPLYQCLSGLQAVRRLGHV
ELVLADNGPLMVLRHLDTLKEVDRAALIDFAKREQVAVYLAGDSDNVEKLIGEEPYYQIE
GLRLAFHPRDFIQVNDTVNQQMVAQAIAWLDVQPDERVLDLFCGMGNFTLPLAKLAREVV
GVEGVAALVANGQYNALNNALPNVSFFHENLESDISRQPWATQGFDKVLLDPARAGAAGV
MSHIVKLAPKRVVYVSCNPTTLARDSQVLLAAGYRLAQVRMLDMFPHTGHLESMALFMQE
PGVAK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtaaactcgcttgacccttttgggcaaggggtagcacaccaccaaggcaaagct
atctttattcctggcgctttaccaggagagcaagctgaaatagagcttaccgagcaaaag
cggcaatatagtcgcggtaagcttaaacgtttgttgaaccgatgcaacgaaagggtcgtt
cctgcttgccctcatttcggaatttgtggaggctgtcagcagcaacacgccaatagccaa
ctacagcaaatgagcaaagcagattcactccagcgtttgattatgcgtgaggctggcgct
tgccctcaattagacccggttatttgtgggtcggaatacggctatcggcggcgggcgagg
ttagggctgctctatcaacccaagcagcatcgattgcaaatggggtttcgccaaaccgag
tctcatgatttagtttgcatcaagcactgcccggttttacgacctgagttggagcgcttg
ttattaccactttatcaatgtttatcgggcttacaggctgttcgccgccttgggcatgtg
gagctggtattagccgataatggtccgttgatggttttacgccaccttgatacccttaaa
gaggtagaccgtgcggcgttaattgactttgccaaacgagagcaggtcgccgtctatctg
gctggtgatagtgataatgtggaaaaactaattggtgaggaaccctattaccagattgag
ggtctacgcttagcgtttcatccgcgtgattttattcaagtcaatgatacggtcaaccag
caaatggtggctcaggctatagcatggctggatgtgcagcctgatgagcgggtgttggat
ctgttctgcggtatgggcaatttcaccttgccgttggcaaagttggctcgtgaagtggtt
ggcgtggaaggagttgcggcgttggtagcgaatgggcagtataatgctctgaataacgcg
ttgcccaatgtgtcttttttccatgaaaatctggaatctgacatcagtcgtcagccgtgg
gcaacacaagggttcgataaagtattgttagatcccgcccgtgcaggtgctgctggggtt
atgtcacatatagttaaactggcgccaaagcgggtggtatatgtttcgtgtaaccccact
acgctggcacgagatagtcaggtgttgttagccgccggttaccgtcttgctcaggtgcga
atgttggatatgtttccccacaccgggcatcttgaatctatggcgctgtttatgcaggag
ccaggggtcgcaaagtag
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