Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C0930
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Entry
YE105_C0930 CDS
T01480
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00300
Lysine biosynthesis
yep00470
D-Amino acid metabolism
yep01100
Metabolic pathways
yep01110
Biosynthesis of secondary metabolites
yep01120
Microbial metabolism in diverse environments
yep01230
Biosynthesis of amino acids
Module
yep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YE105_C0930
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YE105_C0930
Enzymes [BR:
yep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
YE105_C0930
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADZ41426
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Position
1097763..1099025
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AA seq
420 aa
AA seq
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MPRALNDTSSALTAQNLIALPERFGCPVWAYDGEIITSKINQLWNFDVIRFAQKACSNIH
ILRLMHEQGVKVDSVSLGEIERALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVN
AGSIDMLDQLGLHASGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQ
YGLKLVGIHMHIGSGVDYQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEID
TEHYYGLWNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDA
GFNDLMRPAMYGSYHHISVLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRK
LPAANIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIALELI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgcacttaatgacacctcttcggcactgacggcccaaaatctgattgccttg
ccagaacgttttggttgcccggtttgggcctatgatggagaaattatcactagtaaaatc
aatcaattgtggaattttgatgtgattcgatttgcccagaaagcctgctcaaatattcat
attttgcggttgatgcatgagcaaggcgtgaaagttgattcggtatctctgggagaaatt
gagcgcgctttgcaggctggttttcagccggggcaggaacctgctgagattgtctttacc
gccgatttgctggatcaggctaccttactgcgcgtgactgaattaagcattccggttaat
gcaggttccattgatatgcttgatcaactggggctgcatgcgtctggtcacccggtttgg
ttgcgggttaatccaggtttcggccacggacacagtcagaaaaccaatactggtggtgaa
aacagcaaacacggtatttggcatgaggacctgccgcaagccattgcgaaaattcagcaa
tatggattaaaactggtaggtatacatatgcatattggttctggtgttgattatcagcat
ttggaacaagtgtgtgatgccatggtgcaacaggtgattgcgctggggcaggatatcagt
gctatttctgccggtggtggtttatcaatcccctatcaatttggcgatgatgagattgat
accgagcattattacggcttatggaacagcgcacgcgagcggattgccgcgcatttaggc
catccagtcagtcttgagattgaacccggccgcttcctggttgctgaagcaggagtgtta
atcgcgcaggttcgggcggtgaaaaatatgggacgtcggcattatgtattggtggatgcg
ggcttcaatgatttgatgcgaccagccatgtatggcagttaccaccatatttcagtgttg
ccagctgatgggcgctcacttgctaatgaaccgctgattgatactgtggttgctggcccg
ctttgcgagtcaggagatgtgtttactcaggaagcggggggcgggttagagactcgtaaa
ttgcctgccgccaatattggcgattatctggtattccatgacactggtgcctatggtgct
tcaatgtcttcaaactacaatagtcggccattattgccagaagtcttgtttgaacagggg
cagccgcgtttaatccgccgccgccaaaccattgaagagcttatcgcattagagttgatt
taa
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