Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C1084
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Entry
YE105_C1084 CDS
T01480
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C1084
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YE105_C1084
Archaeal homologous recombinant proteins
YE105_C1084
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
ADZ41580
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Position
complement(1294740..1295978)
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQHFFTKSRAAEHQAFLHWLIEQIKENQVDALIVAGDIFDTGAPPSYAR
ELYNRFVVELQPTNCQLVVLGGNHDSVSTLNESRGLLSYLNTTVISCASSNLDQQVIILK
NRQNHPAALLCAIPFLRPRDLVTSQAGESGGQKQLALQEAIAAHYQALYQRAVELRTELG
LPLPIIATGHLTTVGVTTSDSVRDIYIGTLDAFPAHAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFAQQALASVTPIFIPQFQPMQLIKGDLAQIEQQLT
KFADHQGLPVWLDIEVATQDYLTDIQRRIQALAAELPVEVVLLRRSKEQRNNSIERQEKE
TLNELSVTDVFERRLALEADLAAPRQERMRQMFNLVVEDITQGKDATEEQSA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatacctctgactggcatttgggccagcatttctttaccaaaagccgt
gcggctgaacatcaggcattcctgcactggctcatagaacagatcaaagaaaatcaggta
gatgcgctgattgtggcgggtgatatttttgataccggcgccccacccagctatgcacgt
gagctatataaccgtttcgtggttgaactacagccgacgaactgccagttggttgttctg
gggggcaaccatgattcagtatcaacgctgaatgaatctcgcggcttgctttcttatttg
aataccacagtcatttcctgcgccagcagcaatttggatcaacaggttattattttgaaa
aaccgccaaaatcaccctgcggcgctgctgtgcgcgattccctttttacgtccacgggat
ctagtcaccagtcaggcgggtgaatccggtggtcagaaacaactggcgttgcaggaagca
attgctgcccattatcaggcgctttatcagcgagccgtcgagctgcgtaccgagttaggc
ctgcccttgccgattattgctaccgggcacctaactacggtgggggtcactacctcggac
tcggttcgtgatatttacatcggcacattggatgctttcccggcccacgctttccccccg
gcagattatattgctctgggccatattcaccgtgctcagcaggtagcaaaaaccgaacat
atccgttatagcggttcgccaattgccctgagttttgatgagttgagcaaagagaaaagt
gtttatctggtggagtttgcccagcaggcattagcctctgtgaccccaatcttcattcca
caatttcaaccaatgcaattaatcaaaggcgacttagcgcaaattgagcaacagttgact
aaatttgccgaccaccaagggttaccggtgtggctggatatcgaagttgccacacaagat
tatctcactgatattcaaagacgaattcaggcattagccgcagaactccccgttgaggtg
gtactcttacgccgcagcaaagagcagcgtaataacagtattgagcggcaggaaaaggaa
acactcaatgaactgagtgtcactgatgtatttgaacgccggctggcgctagaggcggat
ttagccgcaccacgccaagagcgcatgcgacagatgtttaatctggtggttgaagatatc
acgcaaggtaaagatgccacagaggagcaatctgcatga
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