Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C1282
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Entry
YE105_C1282 CDS
T01480
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C1282
Enzymes [BR:
yep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
YE105_C1282
DNA repair and recombination proteins [BR:
yep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
YE105_C1282
Prokaryotic type
YE105_C1282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADZ41778
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All DBs
Position
1531720..1533165
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AA seq
481 aa
AA seq
DB search
MATHLVWFRNDLRVTDNLALHTACQDPQATVIAVFIATPAQWAAHDMAPRQAAFLLQNLQ
LLQDALAARAIPLHYHQCDDFKDSITWLDDFCQQQQVDALFYNHQYELNERMRDEALVVQ
MGHRAIACHGFHDAVLLPPGSILTGNNEMYKVFTPFRRAFIQRLMMSDCRSVPAPKARTT
AAVIPSQPLAPFDYPQQPVDSQLFPAGEEAALQRLRRFCREDVQDYQQQRDFPAVAGTSC
LSPYLALGILSPRQCVNRLRAECPEVLENADGGAFIWLNELIWREFYRHLLVAYPRLCQH
HPFIGWTDAVIWNHSEQQLIAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMISASFLVKD
LLIDWRQGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDQDGVF
IRRWLPELAAVPDSDIHQPWRWAERQQQSLDYPPPLVEHKQARLATLAAFEAAKRDGSKD
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcatctggtctggtttcgtaatgacttacgcgtcactgacaacttggcattg
catacggcgtgtcaggacccacaagcgacagtgattgcggtgtttattgcgacccccgca
caatgggctgcgcatgatatggcaccgcggcaggccgcatttttgctgcaaaacctgcaa
ttgctacaggatgcactcgccgcgcgggcgatcccactgcactatcatcagtgtgatgat
tttaaggattcgattacttggttggatgatttttgtcagcaacagcaagtggatgcactg
ttttataatcatcagtatgagttgaatgagcggatgcgcgatgaggcattggtggtgcaa
atgggtcatcgtgcgattgcttgtcatggttttcatgacgcggtgttattgccgccgggc
agtatcctgacaggtaataatgaaatgtataaagtgtttactccgtttcgccgtgctttt
atccagcgtttaatgatgagtgattgccgcagtgtcccagccccgaaagctcgtaccacc
gcagcggtgatcccctcacagcccttggctccgtttgattacccgcaacaaccggtagac
agccagctatttccggcgggtgaagaagcggcgttacagcgcttgcgccgtttttgtcgc
gaagatgttcaggactatcaacagcaacgtgattttcccgctgtggcgggcaccagttgc
ctgtcaccttatcttgcgctgggaatactttcaccccgtcaatgtgttaatcgcttgcgg
gcagaatgcccggaggtgttggaaaatgccgatggcggggcttttatttggcttaatgaa
ttgatctggcgtgaattttatcgccatttattggtagcttatccacgattatgccagcat
catccctttattggttggactgatgcagtaatatggaatcactcggaacagcaattaatc
gcctggcagcaagggcgaacaggttatcctattgtcgatgcagccatgcggcaactcaat
gaaaccggttggatgcataatcgcctgcgaatgatcagcgccagttttctggttaaagat
ttgctcatcgactggcgacaaggcgaacgctattttatgtcgcaactgctggacggtgat
ttggctgcaaataatggcggctggcaatgggctgcttctaccgggacagatgccgcacct
tactttcgtatctttaaccccaccacccagggtgagcgttttgaccaagacggcgtgttt
attcgccgctggttgcctgaattggcggcagtaccagacagtgatatccatcagccgtgg
cgttgggccgagcggcaacagcaatcattggattacccaccaccgctggtggagcataag
caggccagattggcgacactcgcggcgtttgaagccgctaagcgggatggcagcaaggat
ccctaa
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