Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C2209
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Entry
YE105_C2209 CDS
T01480
Name
(GenBank) putative toxin transport protein
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YE105_C2209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yep02000
]
YE105_C2209
02044 Secretion system [BR:
yep02044
]
YE105_C2209
Transporters [BR:
yep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
YE105_C2209
Secretion system [BR:
yep02044
]
Type I secretion system
RTX toxin transporter
YE105_C2209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
AAA_16
AAA_21
ABC_ATPase
AAA_18
Rad17
AAA_29
AAA_14
PRK
AAA_28
KAP_NTPase
AAA_25
RsgA_GTPase
AAA_30
RNA_helicase
CoaE
AAA_5
Mg_chelatase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ADZ42705
LinkDB
All DBs
Position
complement(2532002..2534122)
Genome browser
AA seq
706 aa
AA seq
DB search
MMNSTTTQVNQPLEALARAAACFDLAVESSHLAHKVGLAPQDIDNIALCRCANWIGLRAR
AVSYSFSRLEHLPLPILFSHGTQWYVLLALNEQGASVYFPVDGQQKQISQQELASLWCGE
AILLAKAEPQKQKKVPFGFSWFIPVITKYRHQLRNIILVSLLLQGILLVTPMLFETVIDK
VLVSRGMGSLMVLGIAMIALAIVEPCYTFLRGWLFSHLSSRVGAELNTGLYRHLMGLPLG
YFASQQTGQTIAKVREMEQIRSFLTGSALTMLLDLVFVSTFIAVMFCYSQPLTWIVLFSL
VCYLLFWWAAGGMLRKRVKRQYETSAQNTAFLTEAISGLETIKTSATENQFNRSWRHSLA
NYVRASFACARAANIAEQGISLINKVTSAILLWVGVTLVLDGELSPGQFIAFTLFSGYVT
QPILRLAQIWQDFQHTQVALKRIGTILDYPTEPGSAGLLSSSNSPGGLAFKQVRFRYRPD
TAEVIQNLNLDIAGGEFVGITGPSGCGKSTLTKLLQRLYTPQHGQILVDGQDLAITDATT
LRCQMSVVLQESILFSGSIRDNICQCRPNADDAHVEHIARLAGAHDFIAALAQGYQTPVG
ERGSLLSGGQRQRVALARALMADPKILILDEATSALDYESEAAIMRQLPEITRNRTVICI
AHRLNTLRQCHRILVLKEGQVLEQGNHQDLLAQSGTYARLWRLQTE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcaaccacgactcaggttaatcaaccgttggaggcgctggcccgtgctgcg
gcatgttttgatttggctgttgaatcttcacacctggcacacaaggtcggattagcgcct
caagatatcgataatattgctctatgccgttgtgcaaattggattggtttgcgggccagg
gcagttagttattccttttcgcggctagaacatttgccgcttcctattttgttcagtcat
ggcacgcagtggtatgtgttactggcacttaatgaacagggtgcaagcgtatattttccc
gttgatggtcagcaaaaacagataagtcagcaggaacttgccagcttgtggtgtggcgaa
gccatattattggcgaaagctgaaccgcaaaaacaaaagaaagtcccctttggctttagc
tggtttattccggttatcactaaataccgccatcagttgcgtaatatcattttggtttca
ttgctattgcagggcattttgctggtaacgccaatgctatttgaaacggttatcgacaaa
gtcctggtgagccgcggaatgggcagcttaatggtgctgggaattgccatgattgcgctg
gcgattgtggaaccctgctatacctttttacgcgggtggttgttttcacatttatccagc
cgagtgggggccgagcttaacaccgggctttatcgccatttaatggggttgccactgggt
tacttcgcttcacaacaaaccggacaaaccatcgctaaagtgcgagaaatggagcaaatt
cgcagctttctaaccggttctgctttaaccatgctgttggatttggtttttgtcagcacc
tttatcgccgtgatgttttgctatagccaaccactgacatggatagtcttgttctccctc
gtttgttatctgctgttttggtgggctgcgggcggaatgttacgcaagcgggtgaagcgc
caatatgaaaccagtgcacagaatacggcatttctcaccgaagctattagtggattggaa
acaatcaagacatcggccaccgaaaaccagtttaatcggagttggcggcattcgttggca
aattatgtccgtgcctcatttgcttgtgccagagctgccaatattgctgagcaaggtatc
agtttaattaataaagtgacttcggcgattttattgtgggttggcgtcacgttggtattg
gacggagagcttagccccggccagtttatcgcgtttacgttattttcgggttatgtcact
caacctatcttgcgtttggcgcaaatctggcaagattttcagcatacgcaggtggcgcta
aaacgcattggcaccattctggattatcccactgaaccgggtagcgctgggttgttatcg
agttcgaatagccctggggggttggcttttaaacaggtacgtttccgttatcggcccgat
actgccgaagtgatacaaaaccttaatttagatattgctggtggtgagtttgttggtatt
accggtccatctggctgcggaaagtcaacattaaccaagctgctccaacgattatatacg
ccacaacacggacaaattctggtcgatgggcaggatttggctattacggatgccaccaca
ttacgctgtcagatgagtgtggtgttgcaggaaagcatactattttctggctcgatacgt
gacaacatatgccagtgtcggccaaatgctgatgatgctcatgttgagcatattgcccga
ttagctggcgcacatgactttattgctgcactggctcagggttatcaaacgcccgttggc
gaacgcggcagtttgttatcgggtgggcagcggcagcgagttgcattggcgagagcactg
atggcggatcccaaaatactgattcttgatgaagcaaccagtgcgctggattatgagtct
gaggcggcgattatgcgtcagttgccggaaatcacgcgaaatcgcacggtaatatgtatt
gctcatcgtttaaacaccttgcgtcaatgtcatcgtattttggtgttaaaagaggggcaa
gtattagagcagggtaaccatcaagatttactggctcagtccggtacctatgcacgtttg
tggcgattacagaccgagtaa
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