Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C2380
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Entry
YE105_C2380 CDS
T01480
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YE105_C2380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C2380
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YE105_C2380
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ADZ42876
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All DBs
Position
2736541..2737203
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AA seq
220 aa
AA seq
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MYFRVIDTETCGLEGGIVEIASIDVMDGALSNPMSDLVSPDRPISLDAMVIHHITEEMVE
GKPRIAVAVRKYQGSPYYVAHNAPFDRGVLPEMGGQWICTLKLARMLYPDIKHSNQYLRY
ALRLNVSVPDNLYPHRALYDCYVTAALLQRIMRDSGWSAEQMAEITRQPQLLSTFKFGKY
RGKSIEQIARQDPDYLRWMLASITDLTPDMRHTLTYYLAE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcgtgtcatcgatacagagacttgtggcttagagggcggtattgtcgaaatc
gcgtccatcgatgtgatggatggggcattgagcaacccaatgagtgacttggtaagccca
gaccggccaatcagtctcgatgccatggtcattcaccatatcacggaagaaatggtggaa
ggtaagccacggattgctgttgctgttagaaagtatcaaggtagcccttattatgtcgcc
cataacgccccctttgaccgtggtgtattaccggagatgggcggtcaatggatttgcacg
ttaaagctggcccgtatgctctatcctgatattaagcacagtaatcaatatctgcgttac
gctttacgcctgaatgtttcagtgccggataatctttatccgcatcgagctttgtatgat
tgctatgtcaccgcagcactgttgcaacgtatcatgcgagactctgggtggagcgcggag
caaatggcggaaatcacgcggcaaccgcagttgctatcaacatttaagtttggcaaatat
cgggggaaaagtattgaacagatagcccgacaagatccggactatctgcgttggatgctg
gcctcaattaccgaccttacacccgatatgcgccataccctgacatattatctggccgag
taa
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