Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C2583
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Entry
YE105_C2583 CDS
T01480
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yep03032
]
YE105_C2583
03036 Chromosome and associated proteins [BR:
yep03036
]
YE105_C2583
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C2583
DNA replication proteins [BR:
yep03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YE105_C2583
Chromosome and associated proteins [BR:
yep03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
YE105_C2583
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
YE105_C2583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
ADZ43079
LinkDB
All DBs
Position
complement(2974251..2974535)
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHVPTKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGAKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcacgtaccgactaaa
gtcgttgaggatgcagtgaaagaaatgcttgaacatatggctggaacactagctgaaggt
gagcgcattgagatccgcggatttggcagtttttctcttcactaccgtgctccgcgtgtt
ggtcgtaatccaaagaccggcgctaaagttgagttggaaggtaagtacgttccacacttt
aagccaggtaaagagttacgcgatcgcgcgaatatctacggttaa
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