Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C2724
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Entry
YE105_C2724 CDS
T01480
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yep03032
]
YE105_C2724
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C2724
Enzymes [BR:
yep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YE105_C2724
DNA replication proteins [BR:
yep03032
]
Prokaryotic type
DNA Topoisomerases
YE105_C2724
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YE105_C2724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADZ43220
LinkDB
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Position
complement(3150862..3153519)
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AA seq
885 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIASPWELGNV
AAMLERAGGDAARPEWLEAEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTVIAELIFILENPERLMEVIREELVAIKELYNDARRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSALGKVVRFPESQVRSMGRTATG
VRGINLNGDDRVISLIIPRGDGEILTVTENGYGKRTAVEEYPTKSRATQGVISIKVSERN
GKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTTEDEHVVGLQRVA
EPEEDDNILEGESLEGEEGSEEDTALNAPEDEDAADEAEDDDNNV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaataacaccggtcaacatcgaggaagagctgaaaagctcc
tatctggattatgcgatgtccgttattgtcggacgtgctttgccagatgtccgggatgga
ctgaaaccggtgcaccgtcgcgtactgtatgcgatgaatgtactgggtaatgactggaat
aaaccatacaaaaaatcggcccgtgtagtcggggacgttatcggtaaatatcacccgcat
ggtgacagcgcggtctacgacactatagtgcgtatggcccagccgttctcactgcgctat
atgctggtggatgggcagggtaacttcggttccgttgatggcgactccgccgcagcgatg
cgttataccgaaatccgtatgtctaaaattgctcacgaactgttggcggacttagaaaaa
gataccgttgacttcgtgccgaactatgacggtacggagcaaattcctgccgtaatgccg
accaaaatccctaacttgctggtgaacggctcgtcaggtattgccgtcgggatggcaacc
aatattccgccgcataacctttctgaggttattgatggctgtctggcctatatcgaagat
gaaaacatcaccattgaagggttgatggagtacatcccggggccagatttccccactgct
gcgattatcaatggtcgccgtggtattgaagaagcttatcgtactggccgtggcaaggtg
tatatccgtgcccgtgctgaagttgaggctgacgctaaaaccggtcgcgaaaccattatt
gttcacgagatcccgtatcaggtgaacaaggcgcggttgattgaaaaaatcgccgagctg
gtgaaagaaaaacgcgtagaaggtatcagtgcgttgcgtgatgagtctgataaagacggc
atgcgtatcgtgattgaaatcaaacgtgatgctgtcggggaagtggtgctgaacaacctc
tactctctgacgcaattgcaggtgactttcggtatcaatatggtggctctgtctcaaggg
cagcctaagttgcttaacctgaaagacattttggttgctttcgtgcgccaccgccgtgaa
gtggtgactcgccgtaccatttttgaactgcgtaaagcacgtgaccgcgcacatatcctt
gaagcgctggctattgcactggctaacatcgatccgattatcgagttgatccgccgtgca
gcaacacctgccgaagcgaaagctggcttgattgccagcccatgggagttaggtaacgtt
gcagccatgttggaacgtgccggtggtgatgctgcccgccctgaatggctggaagctgag
ttcggtatccgtgacggcaaatattatctcaccgagcagcaagctcaggcgattttggat
ctgcgtttgcagaaactgaccggcctggagcatgaaaaactgctggatgagtataaagag
ctgctgaccgtcattgccgagctgatctttattctggaaaatccagagcgcttgatggaa
gttatccgcgaagagttagtggcgattaaagagctatataatgatgcgcgccgtaccgaa
atcaccgcgaatacctctgacatcaatattgaagacctgattaatcaggaagatgtggtt
gtgacattgtcccatcagggctatgtcaaataccaacctctgtctgattacgaagctcag
cgtcgtggtggtaaaggtaaatcagctgcgcgtattaaagaagaagacttcattgatcgc
ctgctggtcgccaacacccacgatactattttgtgcttctccagccgtggccgtctctat
tggatgaaggtctatcagttgccggaagccagtcgtggcgcacgtggtcgtccgatcgtc
aacttgttgccgctggagccaaatgagcgtatcaccgccattctgccggtgcgtgaatac
gaagaaggtcgtcacatctttatggctaccgccagcggtaccgtgaagaaaaccgcactg
accgagtttagccgtccacgcagtgccggtattattgccgtcaatctgaatgaaggcgat
gaactgattggtgtcgatctgaccgatggcactaacgaagtcatgctgttctctgcattg
ggtaaagtggttcgcttccctgaatcgcaggtccgttcgatgggccgtaccgcgaccggt
gtacgcggtatcaacctcaatggcgacgatcgggttatttctcttatcatccctcgtggc
gatggtgaaatcctgactgtgactgaaaacggttacggtaaacgtaccgcagtggaagaa
tatccaaccaagtcccgtgcgactcagggggttatctccattaaagtcagtgagcgtaat
ggtaaggttgttggggcggtacaagtcgcgccgactgaccaaatcatgatgatcaccgat
gccggtacactggtacgtacccgcgtatcagaggtgagtgttgtggggcgtaatacccag
ggtgtgacacttatccgtaccactgaagacgagcatgtcgttggcctgcaacgtgtagcg
gagccagaagaggatgataacatccttgagggtgaatcattagaaggtgaagagggcagc
gaggaagatactgcactgaatgcaccagaagatgaagatgctgctgacgaagcagaagac
gatgacaataatgtgtaa
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