Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3009
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Entry
YE105_C3009 CDS
T01480
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YE105_C3009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C3009
Enzymes [BR:
yep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
YE105_C3009
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YE105_C3009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADZ43503
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All DBs
Position
3494229..3495605
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AA seq
458 aa
AA seq
DB search
MSQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNFSQPSSGHWYFTLKDDRAQVRC
AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ
LVAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPIIIYPTAVQGAD
APLQIVRAIQLANLRGECDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQQFTRLE
HRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRLLSRRTERLQQRLVQAQPQGQIHRY
NQRVQQQEYRLRQALERQLNGYRQRFSIACSQLEAVSPLATLARGYSVTQTPEGSLLKTT
KQVHTGDKLTTRLQDGWVESEITQIKVAKNPRQRKAAN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatcttccgcgtcatcaatttttaccgtcagccgccttaatcagacggtgcga
caactgctggaaatggaaatgggccaaatctggctcactgccgagatttccaatttttct
cagccgtcgtctggtcactggtatttcaccttaaaagacgatcgggcgcaggtgcgctgc
gcgatgtttcgtaacaccaatcgtcgaaccacttttcgcccacaaaatggccaacaagtg
ttggtcagagcatcgattaccctgtatgaaccgcgtggtgactaccaattaattgccgaa
agtatgcaacctgccggcgatggattgctgcaacagcaatttgagcagcttaaacagcaa
ctggtcgctgaagggcttttcgaccaaagccacaagcaacctctgcccagcccagccaaa
caggtgggggtgataacctcatccagtggtgctgctctgcacgatgttttacaagttttg
caacgccgtgacccttcacttccgattattatttatccgacagcagtgcaaggtgctgat
gctccattgcagatagtccgagccattcaactggcaaatctgcggggggaatgtgatgta
ttgatcgtcgggagaggtggcggctcgttggaagacttgtggagttttaatgacgagcgg
gttgcccgcgctatttttaatagcaggattcccattgtcagtgctgtcggccatgaaact
gatgtcactatcgcggacttcgttgccgatttacgcgccccaaccccatcagccgccgcc
gagctggtcagccgtaaccaaatagagttggtccggcaaattcaggggcagcagcagcgc
atggaaatggcgatggattattatctggcgcagcgccatcagcaattcacccgccttgag
catcggctgcaacagcaacacccgcatttgcgattggcccgtcagcaaacactgctgttg
aaattacaacgccgactggaagatagcgcacaaaaccaaattcgcctattaagtcgacgc
actgaacggctgcaacaacggctagttcaagctcaaccgcaagggcagatccatcgttat
aatcagcgggtacaacagcaggagtaccgcttgcgtcaggcattagagcgccagttgaat
ggctatcgtcaacgttttagtatcgcctgttcacaattggaagcggtcagcccattggct
acactagcccgcggctacagcgtaacgcagacccccgagggcagcttactcaaaaccacg
aaacaagtgcatactggcgacaagcttaccacccgactgcaagatggctgggtggaaagt
gaaatcactcaaatcaaggtggcaaaaaatccccgtcagcgtaaagccgctaactaa
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