Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3043
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Entry
YE105_C3043 CDS
T01480
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00260
Glycine, serine and threonine metabolism
yep00460
Cyanoamino acid metabolism
yep00630
Glyoxylate and dicarboxylate metabolism
yep00670
One carbon pool by folate
yep00680
Methane metabolism
yep01100
Metabolic pathways
yep01110
Biosynthesis of secondary metabolites
yep01120
Microbial metabolism in diverse environments
yep01200
Carbon metabolism
yep01230
Biosynthesis of amino acids
yep01240
Biosynthesis of cofactors
yep04981
Folate transport and metabolism
Module
yep_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YE105_C3043
09102 Energy metabolism
00680 Methane metabolism
YE105_C3043
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YE105_C3043
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YE105_C3043
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YE105_C3043
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
YE105_C3043
Enzymes [BR:
yep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YE105_C3043
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADZ43537
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Position
complement(3538810..3540063)
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYEDMARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAWFFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPANQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVA
VFLERGYKVVSGGTDNHLFLLDLVDKNITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEEESRELAGWMCDVLDNITDEATIERIKQKVLAICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatctatggcgtgcaatggag
caagaagtggtgcgtcaggaagagcacatcgagctgattgcctctgagaactacaccagc
ccgcgtgttatgcaggctcagggttctcagttgaccaacaaatatgctgaaggctatcca
ggcaagcgttactacggtggctgtgagtatgtcgatatcgttgagcagttggctattgac
cgcgcaaaagagttgttcggcgcagattacgccaacgttcagccgcattccggttctcag
gcgaacgtggccgtttactcagcattgctgcaaccaggtgacactgttctggggatgaat
ttggcgcacggcggccatttgacccacggttcaccggttaacttctccggtaaactgtac
aatatcgttccttatggcattgatgaatctggcaaaattgattatgaagatatggcgcgt
caggccgaaattcataaaccaaaaatgatcatcggcggcttctcagcttattccggtatt
gttgattgggcaaaaatgcgcgaaatcgccgacagcatcggcgcatggttctttgtcgat
atggcgcacgtcgctggtttggtggctgcgggtgtttatcctaaccccgttccacatgcg
cacatcgtgaccacgactacgcacaaaacattggctggcccacgcggcggtttgattttg
gcgaaaggcggcgacgaagatctgtataaaaaactgaactcttctgtgttcccagcgaac
cagggcggcccactgatgcacgttatcgcgggcaaagcggttgcgctgaaagaagccatg
gagcctgagttcaaagtttatcaacaacaagtggctaagaacgccaaagctatggtggcg
gtcttcctggaacgcggctataaagtggtttctggcggtacagataaccacttgttcttg
cttgatttggtggataaaaacatcaccggtaaagatgccgatgctgctttgggtcgtgcc
aatatcacggtaaataagaatagcgtgcctaacgatccgaaaagcccgtttgtcacttct
ggtgtgcgtattggtagcccggcaatcactcgccgtggtttcaaagaagaagagtctcgc
gagctggctggatggatgtgtgatgtgttggataacatcaccgacgaagcgactatcgaa
cgtatcaaacagaaagttctggctatctgcgcccgtttcccggtttacgcataa
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