Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3071
Help
Entry
YE105_C3071 CDS
T01480
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YE105_C3071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yep03019
]
YE105_C3071
03009 Ribosome biogenesis [BR:
yep03009
]
YE105_C3071
03036 Chromosome and associated proteins [BR:
yep03036
]
YE105_C3071
Enzymes [BR:
yep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YE105_C3071
Messenger RNA biogenesis [BR:
yep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YE105_C3071
Ribosome biogenesis [BR:
yep03009
]
Eukaryotic type
90S particles
RNase
YE105_C3071
Prokaryotic type
rRNA processing factors
YE105_C3071
Chromosome and associated proteins [BR:
yep03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YE105_C3071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ADZ43565
LinkDB
All DBs
Position
complement(3570797..3571477)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQDLLLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIHTIERLILAWYHSRLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaataaataggctacagcggaagctgggctacacttttcaacagcag
gatctcttgctgcaagcactgactcatcgtagcgccagtagcaaacataacgagcgtttg
gagttcttgggtgactctatattaagtttcgttattgccaatgagttgtaccgccgtttc
cctcgtgttgatgaaggggatatgagtcggatgcgagcaaccttggttagaggtaatacg
ctagccgaaatggcccgtgagtttgacctcggtgaatgtttacgccttgggccgggtgaa
ttgaaaagtggtggtttccgccgggaatcaattttggcagatacagtcgaagcgttaatc
ggcggtatattcttagacagcgatattcatacgattgaacggctgattctcgcctggtat
cacagtcgattagaagaaatcagccctggtgataagcagaaagacccaaaaacgcgcctg
caagaatatttacagggccgtcatctgccattaccttcttatctggttgtgcaggttcgt
ggtgaagcacatgatcaggaatttactatccactgccaggtgagtggcttgaatgaaccg
gtaataggtaccggctcaagtcgccgtaaagctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga
DBGET
integrated database retrieval system
