Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3089
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Entry
YE105_C3089 CDS
T01480
Name
(GenBank) recombination and repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C3089
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YE105_C3089
TLS (translesion DNA synthesis) factors
Other SOS response factors
YE105_C3089
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
AAA_22
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
ADZ43583
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Position
3590710..3592371
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AA seq
553 aa
AA seq
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MLTQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAIDALGLCLGSRSDGSMVRLGAT
RADICARFSLADTPSARQWLEENHLDDSNECLLRRAIGSDGRSRGFINGTAVPLSQLREL
GQHLIQIHGQHAHQLLLRPDHQKQLLDAYANQSVLLTEMKAVYQIWHQSCRALALHQQQS
LERNARHELLQYQLKELNSFAPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEHN
NILSQLYSAKHQLTELAGMDEQFNNLLNMLEEASIQISEASDELRHYAEQFDMDPNRLYE
LEQRLSRQLNLARKHHVTPEELPQFHQQLLDEQEQLSQQETDHEQLSHAVNTHYQHALAI
AKRLHEERQHYADELAALITESMRELSMPHGKFTIETLFEPEHLSAEGATRVEFCVTTNP
GQPLQPLAKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQL
GESTQVMCVTHLPQVAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVT
KNTLANAKELLAA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccaattaaccatcagtaactttgctattgtgcgtgagctagaaattgatttt
caacctggaatgacagcaattactggtgagacaggggcgggtaaatccatcgccatagat
gcattagggttatgccttggcagccgttcagacggtagtatggtgcgtttgggggcaacc
cgcgctgatatttgtgctcgtttctcattagcagacaccccatcagcccgacaatggttg
gaagagaatcatctggatgacagcaacgagtgtttgctgcggcgtgctattggctctgat
ggccgctcaagagggtttattaatggaacagccgtaccattgtcccaattacgggaactg
gggcagcatttaattcaaatccacggccagcatgcccatcaactattgctaaggcctgat
catcaaaagcaattgctagatgcttacgcaaaccaatctgtcctgctcactgaaatgaaa
gcagtctatcaaatctggcaccaaagctgccgtgcactggcactgcatcagcaacaatcg
ctggagcggaatgctcgccatgagctattgcaatatcagttaaaagagctgaactcattt
gccccacaagccggggaatatgaacaaattgatatcgaatataagcgtctggcaaacagt
ggtcagttgttatcactcagccaacaaaccctacagttactgtctgatgatgagcataat
aatattctcagccaactctactcagccaagcaccaactcacagagctggcaggaatggat
gagcaatttaataatttgctgaatatgctggaagaggcctcgatccaaatcagtgaagcc
agtgatgaattacgtcactatgccgaacaatttgatatggatccgaatcgtctgtatgaa
ctggaacagcggttatctcgtcaattaaatctggctcgtaaacaccatgttacaccggaa
gagttaccacaatttcatcaacaactactggatgagcaagaacagctctcacaacaagaa
actgatcacgagcagctcagccatgctgtaaatactcactatcagcatgcattagctatc
gccaagcggttacatgaagaacgccaacattatgctgacgaattggcagcgctgatcacc
gaaagcatgcgcgaactgtccatgccacatggcaaattcactattgaaacgctgtttgaa
cctgagcacctgagtgctgaaggggctacccgagtcgaattctgtgttaccacaaacccc
ggccaaccactacagccgctggctaaagttgcctcaggtggtgagctttctcgcatcgca
ttggctattcaggttattacagcgcgtaaaatggacacgcctgcacttatctttgatgaa
gtcgatgtaggtatcagtgggccaacagcagccatcgtgggtcgcctgttacgccagttg
ggtgagtccactcaagttatgtgtgtcactcacctgccgcaagtagcaggttgtggtcat
caacatttctttgtgagtaaacaaactgatggcactgaaactgaaactcatatgcatcgg
ttagataaaaaagcccgtttacaagaattggcgcgccttctgggcggtagtgaagtgacg
aaaaacaccttggcaaatgcaaaagaattgctcgcagcgtag
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