Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3156
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Entry
YE105_C3156 CDS
T01480
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03030
DNA replication
yep03430
Mismatch repair
yep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YE105_C3156
03430 Mismatch repair
YE105_C3156
03440 Homologous recombination
YE105_C3156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yep03032
]
YE105_C3156
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C3156
Enzymes [BR:
yep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YE105_C3156
DNA replication proteins [BR:
yep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YE105_C3156
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YE105_C3156
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADZ43650
LinkDB
All DBs
Position
complement(3654635..3655417)
Genome browser
AA seq
260 aa
AA seq
DB search
MQVTPTRQIVLDTETTGMNKLGVHYEGHKIIEIGAVEVINRRLTGRNFHVYIKPDRLVDP
EAYGVHGISDEFLADKPTFADIAPEFIEFIRGAELVIHNAAFDIGFMDYEFRMLQQDIPK
TETFCTITDSLLLARRLFPGKRNNLDALCDRYQIDNTKRTLHGALLDAEILAEVYLAMTG
GQTSLSFSMEGDQSQNNSSDDIQRITRPASGLKIIYAAEDELAAHESRLDLVMKKGGSCL
WRMPLETEDSISAENSANAE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttacaccgaccagacaaattgttctggatactgaaaccaccggtatgaataag
ctgggcgttcattatgaaggccataagattattgaaatcggcgctgttgaagtgatcaac
cgtcgtctgaccggcagaaatttccatgtttatatcaaacctgaccgtctggtcgatccg
gaagcttacggggttcatggtatcagcgacgagtttttagctgataaacccacttttgcg
gatattgcaccggagtttatcgagtttatccgcggtgctgagttagtcatccataacgcg
gcgtttgatatcggctttatggattatgaattccgaatgttgcagcaggacattccgaaa
acagaaaccttttgcaccatcacggatagcttgttactggcgcgccgcttgttccctggc
aagcgaaataaccttgatgccctgtgcgatcgctatcagatagataataccaagcgaaca
ttgcacggcgcgttactcgatgccgaaattctggcagaagtttatctggcgatgacgggc
gggcagacgtcactttctttctcaatggaaggtgatcagtcgcagaataattcctcagac
gatatccagcgtattacccggccagcatctggactgaaaataatttatgccgctgaagat
gagttagccgctcatgagtcacgtctggatttggtgatgaaaaagggcggtagctgtctc
tggcgtatgccactagagacggaagacagcataagcgcagaaaatagtgcaaacgctgaa
taa
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