Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3205
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Entry
YE105_C3205 CDS
T01480
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00330
Arginine and proline metabolism
yep00480
Glutathione metabolism
yep01100
Metabolic pathways
yep01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
YE105_C3205
09106 Metabolism of other amino acids
00480 Glutathione metabolism
YE105_C3205
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
YE105_C3205
Enzymes [BR:
yep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
YE105_C3205
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADZ43699
LinkDB
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Position
complement(3709548..3711710)
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AA seq
720 aa
AA seq
DB search
MTQLKIATSARLASYIESQRGMVYLNQTDFTDVAAVVMSVEDANAGILSKLYDLGFAIPT
FVAVTAEQTVSAEYLPLIKGVIILGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MKNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFDERYLRQQLSEVAPERAGDARPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRM
WMDCVKLGIETRKLLLERCSMLRPFIPPTVRGKNWQDYDTDIIANDVRFFNFEPNERWHG
FEGYNQDQYLVDPCKLLLTTPGIDASTGQYTQFGVPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENPSKMAHLVDMLVQFERYLEQDALLCDVLPTIYRKNEERYRGYTLRQLCQEMH
DLYARYDVKQLQKDMFRKASFPQVVMNPQDANIQFVRDNIELIPIAKAEGRIAAEGALPY
PPGVLCVVPGEMWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVERRRIFGYVITQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattaaaaatagcaacaagtgctcgtttggcttcttatatagaaagccagcgt
ggaatggtatatctcaatcagactgattttacggatgttgccgccgtggtgatgtcggta
gaagatgcgaatgccggtatcttgtcaaagctatatgatctgggctttgctattcctact
tttgttgctgtcacggcagaacagacagtttctgcggagtatttgcctcttattaaaggc
gtcatcatactcggcgaggcaaataaggcattttataatgctcaggtagaggctgccgcc
agtgaatatcaaaaaaatctgttaccgccttttttctcaacattaaagaaatatgtcgag
atgaaaaactcaacctttgcttgcccagggcatcaaggcggtgagttcttccgtaagcat
cccgctggccgtcagttttttgaattctatggtgagacaattttccggtcagatatgtgt
aacgctgatgtcaaattaggcgacttacttatccatgaaggcgcggcaaaagatgcacag
aaatatgcagctaaggtctttaatgcagataaaacctattttgttctgaatgggacttca
gcggctaataaagtggtgactaatgctttattgacccgtggtgatttggtgttattcgat
cgaaataaccataaatccaaccaccacggagcactaattcaagcaggggcgacgccagtc
tatttagaaactgcccgtaacccgtttggtttcattggcggtattgatgcacactgtttc
gatgagcgttatttacgccagcaattaagtgaggttgcccctgaacgtgcgggtgatgca
cggccattcagattggctatcattcagttaggtacctatgacggtactgtgtataacgca
cgacaggtggttgatagtattggtcatttatgtgattacattttgtttgactcggcgtgg
gtgggttacgaacaatttatcccaatgatgaaagatttctcgccgttgctgctggaactc
aatgaaaacgatcctgggattattgtgactcagtcggtacacaagcagcaggctggtttt
tcccaaacctcgcaagtacataaaaaagataatcatatcaaaggacaaaagcgccactgt
aaccataagcgttttaacaatgcatttatgctacatgcctcgaccagcccgttttatcca
ttatttgcagcattggacgtcaatgccaaaatacactctggcgatagtggccgccgtatg
tggatggactgtgtcaaactcggtatcgagacccgtaaattattattagagcgttgttca
atgttgcggccatttattccacctacagtgagggggaaaaattggcaggattatgatacg
gatattattgccaatgatgttcgcttctttaattttgaacccaatgagcgctggcatggg
tttgaaggatataaccaagaccaatatttggttgacccatgtaagttactgctgaccacg
ccgggtattgatgccagtactggacaatatacccagtttggtgtgccagcagcgatactg
gcgacgttcctgcgcgaaaatggcattgtgccggaaaaatgcgatctgaattcgatcttg
ttcctgctgacgccggcggaaaacccaagcaaaatggctcatctggttgatatgttagtg
caatttgagcgctatcttgaacaagatgcactgctgtgtgatgtattgccaacgatatat
cgtaaaaatgaagagcgttatcgcggctataccttgcgtcagttatgccaagagatgcat
gacctgtatgcccgttatgatgtgaagcaactgcaaaaggatatgttccgaaaagccagc
ttcccgcaagttgttatgaatcctcaggatgccaatattcaatttgtccgtgacaatatt
gaattgatccctattgctaaggcggaagggcgtattgcggctgaaggtgcattgccctat
ccgccgggcgtgttgtgtgtcgttccgggggaaatgtggggtggggcggtgcagcgttat
ttcctcgcattagaggaggggatcaatttattgccgggcttctcaccggaattgcagggt
gtttatatcgaaaaaggagatgtggagcggcggcgtatttttggttatgtcattactcag
taa
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