Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3216
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Entry
YE105_C3216 CDS
T01480
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00330
Arginine and proline metabolism
yep00480
Glutathione metabolism
yep01100
Metabolic pathways
yep01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
YE105_C3216
09106 Metabolism of other amino acids
00480 Glutathione metabolism
YE105_C3216
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
YE105_C3216
Enzymes [BR:
yep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
YE105_C3216
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
ADZ43710
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Position
complement(3721457..3723619)
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AA seq
720 aa
AA seq
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MEKLKVAVSANTSNCFTTGREIVDIHDTNFTDISAVVISVDDAVTGLLDRIEQTGFSLPI
FVAVCHQEELPAEILPRVTSVFKLDDGNNDFYGKQLEAAATKYEKEVLPPFFGSLVEYVQ
QGNAAFDCPGHQGGQFFRRHPAGRQFFDYFGGTLFRSDLCNADVSMGDLLIHEGAPCAAQ
QHAAKVFNADKTYFVLNGTSSSNKVALHALLTPGDLVLFDRNNHKSVHHGALIQAGATPV
YLETARNPFGLIGGIDSHCFEEKYLRNLIREVAPERAAEQRPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGILVTQSVHKQQAGF
SQTSQIHKKDKHIKGQARYVNHKRMNNAFMMQASTSPFYPLFAALDVNARMHEGESGKRM
WMDCVKLGIETRKQLLKLCQHIRPFVPETIDGRRWEEFDTDQMANDLRFFAFVPGERWHS
FAGYAEHQYFVDPCKLMLTTPGINVQTGEYETFGVPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLLEQDAPLAEVLPSIYQANEARYRGYSIRQLCQEMH
DLYVSHNVKELQKEMFRKAHFPKVVMNPQQAHIEFVRGNIELVALDQIEGRIAAEGALPY
PPGILCVVPGEVWGGSVQRYFLALEEGINLLPSFAPELQGVYIQQDVDGRKRAYGYVIKP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattaaaagttgcggtcagtgccaatacatcaaattgctttaccactggacgt
gaaattgttgatattcatgatacaaatttcactgatatctccgccgtcgttatttccgta
gatgacgcagtgacgggtctactcgataggatagaacaaaccggttttagcctgccgata
ttcgttgccgtttgccaccaagaagagttacccgctgaaatcttaccgcgagtgaccagt
gtgtttaaactggatgatggcaataatgatttttatggtaaacaactggaagccgccgca
accaaatatgaaaaagaagtcctgccgccatttttcggcagcttagtagaatatgtgcag
caggggaatgccgcgttcgactgcccagggcatcagggcgggcaattcttccgccgccat
ccggctggccgtcaattctttgattattttggtgggaccttattccgttccgatttatgc
aatgctgacgtttctatgggtgacctgctcattcatgaaggggcaccttgtgcggcacag
caacacgcggcaaaagtctttaatgccgataaaacctactttgttctgaatggaacctct
tcttcaaataaagtggcactacacgctttattgaccccaggtgatttagtcctttttgat
cgtaataaccataagtctgtccatcatggtgcattaattcaggctggggcgaccccggta
tatttggaaaccgcgcgtaacccatttggtcttatcggcggcatcgattcgcactgcttt
gaagagaaatatctgcgcaatttaattcgcgaagtggcaccagagcgggccgcagaacaa
cggccattccgcttggctgtgattcagttaggtacctatgacggtacgatttataacgct
cgtcaagtggtggataagattggtcatctgtgtgactacattctgtttgactctgcatgg
gtgggttatgaacagttcatcccaatgatgaaagattgttctccactgctgctggaattg
aatgaaaacgatccgggtattctggtgactcaatctgtccacaagcagcaggctggtttc
tctcagacttctcaaatccacaaaaaagataaacatatcaaaggtcaggcgcgctatgtg
aatcataaacgaatgaataacgcgtttatgatgcaggcctcaaccagcccattctatccg
ctatttgctgcgctggatgtgaatgcgagaatgcatgaaggtgaaagcggtaagcgcatg
tggatggactgcgtcaagctggggatcgaaacccgtaaacagttgctgaagctatgccaa
cacattcgcccgttcgtgccggaaactattgatggccgccggtgggaggagttcgatacc
gaccaaatggccaatgatctgcgcttctttgcctttgttccgggggaacgttggcactcc
tttgcgggctacgctgaacatcaatattttgtcgacccatgcaaactgatgctgaccaca
ccaggtatcaatgtgcagactggcgagtatgagacgtttggtgttccggccacaattcta
gcgaacttcttgcgtgaaaatggcatcgtgccagaaaaatgcgatcttaactcgattctg
ttcctgctgacccctgcggaagatatggccaagatgcagcatcttgttgctcaaattgcg
cgttttgagcgcctgttagaacaagatgcgccgttagctgaagtgttaccatcaatctac
caggctaacgaagcgcgttatcggggttactccatccgccagctgtgtcaggaaatgcat
gatctgtatgtcagccacaatgtgaaagagttgcagaaagagatgttccgtaaggcgcat
ttcccgaaagtagtgatgaatccgcaacaagcacatatcgagtttgtccgtggcaatatc
gagttggtggcattggatcagatagaaggccgtatcgccgccgagggtgcgctgccttat
ccacccggtattctgtgtgtcgttcccggtgaagtatggggtggttcagtacagcgttac
ttcctggcgttggaagagggcattaacctgttaccgagctttgcgcctgagctacaaggg
gtctacatccagcaagatgtcgatggccgtaaacgtgcttatggctatgtcatcaaacca
taa
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