Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3482
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Entry
YE105_C3482 CDS
T01480
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yep03000
]
YE105_C3482
Transcription factors [BR:
yep03000
]
Prokaryotic type
Helix-turn-helix
LacI family
YE105_C3482
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_1
Peripla_BP_3
HTH_3
HTH_23
HTH_IclR
Peripla_BP_4
HTH_31
HTH_7
MarR_2
CENP-B_N
HTH_Tnp_ISL3
HTH_Crp_2
SpoIIID
MarR
HTH_AraC
TrmB
AAA_18
HTH_26
HTH_24
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ADZ43976
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Position
complement(4006382..4007329)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARMSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLFYQQGYDPILMESQFDPELVSEHLHVLQQRHVD
GVILFGFTGLTADMLAPWQEKMVVLAREYTGFSSVCYDDEGAVRLLMNKLRQAGHRHISY
IGVQPSDATTGMRRHQSYLDYCQQHGLTSTVALGELSYQSGFQLAPQVIKPDTSALVCAS
DTIAMGVSKYLQQQGQQHIQVCGIGNTPLLHFLFPNSLSVELGYGSAGVKAAQQLLDQLN
NNQPLQQIIIPGQLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccgtttgaccattaaggacattgcccgcatgagtggagttggaaaatccacg
gtttcacgggtattaaacaatgaaggcagtgtcagcccacagacgcgtgagcgagttgag
gcggttatccgtcagcagggttttaccccatcaaaatcggcccgcgcgatgcgtggtcag
agcgataaagtggtggggattattgtctcgcgtctggattctccctctgagaatcaggcg
gtgcgcaccatgttgccgctgttctatcagcaaggttacgaccctattttgatggagagc
cagtttgatcctgagctggttagcgagcatctgcatgttttacaacagcgccatgtggat
ggggtgattctgtttggtttcaccggcttaaccgcagacatgctcgcgccgtggcaggaa
aaaatggtggtgctggcgcgagaatataccggtttctcttcggtttgttatgacgatgaa
ggagcggtgcggctgcttatgaataaactgcgccaggccgggcatcgccatattagttat
atcggtgtgcagccctcggatgccacgaccggtatgcgtcgtcatcaatcttatctcgat
tactgccagcaacatggtctgacttccactgttgcgttgggagaattgagctatcagagc
ggctttcagcttgcgcctcaagtgataaaacccgatacctctgcactggtatgtgcctct
gatactattgctatgggggtaagtaagtacttgcagcagcaagggcaacaacacatccag
gtatgtggtatcggcaacacaccgttgttgcacttcttgttccccaatagcctgtcagtc
gagttgggttatggtagtgcaggtgtgaaagcggcacagcaactgcttgatcaacttaat
aataaccaaccccttcaacaaattattatccccggccaattggcttga
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