Yersinia enterocolitica 2516-87: CH48_111
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Entry
CH48_111 CDS
T03644
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yet03032
]
CH48_111 (ihfB)
03036 Chromosome and associated proteins [BR:
yet03036
]
CH48_111 (ihfB)
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_111 (ihfB)
DNA replication proteins [BR:
yet03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CH48_111 (ihfB)
Chromosome and associated proteins [BR:
yet03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CH48_111 (ihfB)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CH48_111 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AJJ27911
UniProt:
A0A0E1NHN6
LinkDB
All DBs
Position
complement(126356..126640)
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHVPTKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGAKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcacgtaccgactaaa
gtcgttgaggatgcagtgaaagaaatgcttgaacatatggctggaacactagctgaaggt
gagcgcattgagatccgcggatttggcagtttttctcttcactaccgtgctccgcgtgtt
ggtcgtaatccaaagaccggcgctaaagttgagttggaaggtaagtacgttccacacttt
aagccaggtaaagagttacgcgatcgcgcgaatatctacggttaa
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