Yersinia enterocolitica 2516-87: CH48_1152
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Entry
CH48_1152 CDS
T03644
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yet03016
]
CH48_1152 (truB)
Enzymes [BR:
yet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CH48_1152 (truB)
Transfer RNA biogenesis [BR:
yet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH48_1152 (truB)
Prokaryotic type
CH48_1152 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJJ27103
UniProt:
A0A0E1ND62
LinkDB
All DBs
Position
complement(1308294..1309283)
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AA seq
329 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVIQAQMDAALDSFRGSSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAIVETAQAEERSPNAELDAL
LLPMDSAVLNFPEVNLLPTVAAYVKQGQPVHVAGAPGEGMVRITEGEERNFIGIGTIAED
GRVAPKRLVVEHVDGANPVVAGVAAGNTP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacgtctctttagcgcaaaccgc
gcaggccataccggtgcactcgatccattggcgaccggtatgttacctatctgtttgggt
gaagcgaccaagttttcccaatttttgctcgattcagataagcgctatcgagtggttgcc
cgtttaggtcaacgcacggatacctcagatgccgaaggcgcattaatcagcgagcgtgaa
gttaatgtcatacaggcacagatggatgccgcgttggacagtttccgtggtagtagccag
caggtgccatccatgtattctgcgctgaagcatcaaggcaaaccgctgtatgaatatgct
cgccaagggattgaagttgagcgtgaagcgcgcagtattactgtgtatgaactgctgttt
atccgctgggaaggtaatgacctggaactggaaatccactgttccaaaggcacttatatt
cgtaccattattgatgatttaggtgaattactggggtgcggcgcacatgtgagttatctg
cgtcggttgcaagttgcgacttatccaagtgaccgcatggtgacgttggaacagttgacg
gcaatcgttgaaacagcgcaagcagaagagcggtcgccaaatgctgaactggatgcgttg
ctattaccgatggatagtgcggtattaaacttccctgaagtcaatctgttacctactgtt
gcggcctatgtgaaacaagggcaaccagtacatgtagcgggagctcctggtgaaggaatg
gtccgtatcactgaaggtgaagagcgtaatttcattggtattggcacgattgctgaagat
ggccgcgttgctccgaaacgcttggttgtagaacatgtggatggtgcaaaccctgttgta
gcaggtgtagcggcaggaaacacaccgtag
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