Yersinia enterocolitica 2516-87: CH48_1226
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Entry
CH48_1226 CDS
T03644
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH48_1226 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yet03019
]
CH48_1226 (orn)
03009 Ribosome biogenesis [BR:
yet03009
]
CH48_1226 (orn)
Messenger RNA biogenesis [BR:
yet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CH48_1226 (orn)
Ribosome biogenesis [BR:
yet03009
]
Eukaryotic type
Pre-60S particles
RNases
CH48_1226 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJJ25710
UniProt:
A0A0E1N9M5
LinkDB
All DBs
Position
complement(1382218..1382763)
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AA seq
181 aa
AA seq
DB search
MAENQNNLIWIDLEMTGLDPEKDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDE
WNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFKKQNTHQALDDIRESVAELAYYREHFIQ
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatcaaaataatctgatctggatcgatctggaaatgaccggtcttgatcct
gaaaaggatcggatcatcgagatcgctacgctggtcaccgatgctaatttgaatatcctg
gcagaaggcccggtgttggctgtccatcaatctgatgagcagcttgggctaatggatgag
tggaatgtgcgcactcatactggcagtggtttggtcgagcgggtcaaagccagcccgttt
aatgatcatgatgctgaattgcaaaccattgagtttctaaagcagtgggttccggcaggc
acttcgcctatctgtggtaacagtgtgggccaagatcgccgcttcttgttccgttatatg
ccagagttggaagcatatttccattaccgctatctggatgtcagcaccttgaaagagctg
gcgcgccgctggaaacccgagattttggccggttttaaaaagcaaaatactcatcaggca
ctggatgatattcgcgagtccgtggctgagctggcctactaccgcgaacattttattcaa
tcctaa
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