Yersinia enterocolitica 2516-87: CH48_1299
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Entry
CH48_1299 CDS
T03644
Symbol
sseC
Name
(GenBank) secreted effector protein sseC
KO
K15345
secreted effector protein SseC
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yet02000
]
CH48_1299 (sseC)
Transporters [BR:
yet02000
]
Other transporters
Pores ion channels [TC:
1
]
CH48_1299 (sseC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
T_hemolysin
DUF1525
Motif
Other DBs
NCBI-ProteinID:
AJJ29025
LinkDB
All DBs
Position
complement(1458467..1459927)
Genome browser
AA seq
486 aa
AA seq
DB search
MSHSIGINTLVLDPWGNAVVNKNSPLSKEKVLDWRDATRSLPSEANTNLPKVPQREAQSA
LDRLLGSLSHSGVGGDCGRLSLDNPGETDIQQIMSMVSSLNLGLFSNLCKSISQQMERAT
DVQTFLRDKRVAEYQQQIDKAVEQADKAKKAGIFTAVFDWIVGAVEVVYGALKVAEGVLT
GDPLAIASGVAYLAAGTAGLVKAAAETAMLLGASKEKCQEVIDVAGKVQLGCECFAMAID
IFQAARAINAARTVTKGASEVLKSGASEALSDAIKRGASGEIEQLAEKFGKDVSQQVSRN
ISLNVMETEMVEVGNMTSAAAKQAAKAEIALVRNITKSFTHEGIEKLVGGVAKKLAQDAI
KKGITLTAEQFSQQCVKAIMKKSVTTILKDIATSPLLIMQKCTAAAGQVNSGQLAIQSAN
LRKEIEKLILDQDFTQFMDEWVERNKQHQLKQLKDTSEAAQDTVTKLSDNIKQNSMLQTQ
IAGSLV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattccattggtattaatacattagttttggacccttggggcaacgcggtggtt
aataaaaacagcccattatccaaagaaaaagtacttgattggcgagatgctactcgatca
ttaccctcagaggctaacacgaacttaccgaaagtgccgcagcgagaagcacaaagcgca
ttggatcgcttactggggtctttatctcattcaggtgtagggggagattgtggccgatta
tctcttgataatccgggtgagaccgatatacagcagattatgtcgatggtcagtagcttg
aatcttgggcttttttccaacttgtgcaagtcgattagccaacaaatggaacgcgccacc
gatgtgcaaacttttctgcgcgataagcgggttgcagaataccaacaacaaatcgataag
gctgttgagcaagcagataaggcgaaaaaagccggtatttttactgcggtatttgactgg
atcgtgggtgctgtcgaggtggtctatggggcattaaaagttgccgagggggtgttaacg
ggtgaccccttggcgatagcctcaggggttgcttatctggctgcgggcacggcggggttg
gtcaaagccgccgcggaaaccgctatgctgttaggcgcatcaaaagaaaaatgtcaggaa
gttattgatgtagcaggaaaagttcagctaggttgtgaatgttttgctatggcaattgac
atatttcaggcagcccgcgcaatcaatgcggcgcgtaccgtgaccaagggggcgagcgag
gtcctaaaatctggtgcgagtgaagcattgagcgacgctatcaaacgcggagccagtggt
gagatagaacaattagctgagaagtttggcaaggatgtcagccaacaagttagccgcaat
atctcactgaatgtgatggaaactgaaatggttgaggttggcaatatgacgtcggcagcc
gctaaacaggcggccaaggcggaaatagcgttggtgcgcaatatcactaagtcatttact
catgaagggattgaaaagctggttggtggtgtggcaaaaaaattggctcaggatgcaata
aaaaaaggcataactctcacggcggaacaattcagccagcaatgtgttaaagccattatg
aaaaagtcagtgacgacgattttaaaagatatagccacatcgccactgctcattatgcaa
aaatgtactgctgccgcagggcaagttaatagtggccagttagctattcaaagtgcaaat
ctgcgaaaagagattgaaaagcttattcttgatcaggattttactcaatttatggatgaa
tgggtcgaaagaaataagcagcatcaacttaaacaacttaaagatacttccgaggcagca
caagatactgtgactaaattaagcgataatattaaacagaatagcatgttacaaactcaa
atcgccggttcattggtatag
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