Yersinia enterocolitica 2516-87: CH48_1340
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Entry
CH48_1340 CDS
T03644
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH48_1340 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yet03021
]
CH48_1340 (rpoA)
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_1340 (rpoA)
Enzymes [BR:
yet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CH48_1340 (rpoA)
Transcription machinery [BR:
yet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CH48_1340 (rpoA)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CH48_1340 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AJJ27095
UniProt:
A0A0E1NDK9
LinkDB
All DBs
Position
complement(1494074..1495066)
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADNE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aacgcactgcgccgtattctgctttcatctatgcctggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttattctt
accctgaataagtctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgagaacgcatctatt
agtatgcgtatcaaagttcaacgtggtcggggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtttgttagtagacgcatgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ttggttatcgagatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacagcttgaagctttcgttgacctacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagtttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgcctaacctgggtaaaaaatctctc
actgagattaaagacgtgctcgcatcacgtggtctttctttaggcatgcgcctggaaaat
tggccaccggctagcattgctgataacgagtaa
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