Yersinia enterocolitica 2516-87: CH48_1703
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Entry
CH48_1703 CDS
T03644
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03030
DNA replication
yet03410
Base excision repair
yet03420
Nucleotide excision repair
yet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH48_1703 (polA)
03410 Base excision repair
CH48_1703 (polA)
03420 Nucleotide excision repair
CH48_1703 (polA)
03440 Homologous recombination
CH48_1703 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yet03032
]
CH48_1703 (polA)
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_1703 (polA)
Enzymes [BR:
yet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH48_1703 (polA)
DNA replication proteins [BR:
yet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CH48_1703 (polA)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CH48_1703 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH48_1703 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
DUF2529
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJJ27034
LinkDB
All DBs
Position
1902841..1905639
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSKGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDSLFSNLDKIPTLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDITCDELNVSAPDDEQLHQLFSRYEFKRWLADVEAGKWLDGK
KDRPTAQASNKAFAAPESAPVAEVTAVLSQENYQTILDEKSLSDWIERLKKAEVFAFDTE
TDGLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPAQLDRDWVLAQLKPLLEDDKALKV
GQNLKFDQSMLARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPIL
SRIERTGVLIDQNILVAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQVILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPEGYRIMAADYSQIELRIMAHL
SQDKGLLAAFAAGKDIHRATAAEVFGLSLEKVTNEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNATRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQQPEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGYNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattaatcctcgtagacggttcctcttacctctatcgt
gcttaccatgcttttccgccgctaaccaacagcaaaggcgagccaacgggcgcgatgtat
ggcgtgttgaacatgttgcgcagcctgttgctgcaataccgaccaagccatgtcgccgta
gtttttgatgccaagggtaaaacatttcgtgacgagcttttcgcggaatataagtctcac
cgcccacccatgcccgatgatttgcgggctcaaattgagcctcttcaccaaatggttaag
gctatggggctacctttattggttgtttccggtgttgaggctgacgatgttattggtact
ttggcacaagaggctgaaaaagcaggtcatgccgtattaattagtaccggtgataaagat
atggcgcaattagttacgccaaatatcactcttattaatacaatgaataacgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttccccctgaactgattattgattttctc
gctctgatgggtgactcctccgataatattccgggagttccaggtgttggtgagaaaacg
gcacaggctttattgcaaggtctgggtggattggactcactatttagtaatttggataag
atacccacactgacattccgtggtgcaaaaacgatgtctgccaaattggagcagaataaa
gatgttgcttatctctcttataaattagccacgattaaaacggatgttgaactggatata
acttgtgatgagttgaacgtctcagcgccggatgatgagcaattacatcaattattcagt
cgttatgagtttaagcgctggcttgcggatgtagaggctggcaaatggctggatggtaaa
aaagataggccaacagcgcaggcaagcaataaagcttttgcagcaccagagtctgcacct
gtggctgaagtgaccgctgtgctctcacaagaaaattatcagactatcttggatgaaaaa
tctttaagcgactggattgagcggcttaaaaaggcagaggtttttgcttttgatactgaa
actgacggccttgataccctcagcagtaatttaattggcctctcttttgcagtggcaccg
ggtgaagcagcttacctgccattagcacatgattatttggatgcccctgctcagcttgat
agggattgggttctggcccagcttaaacccttgctagaagatgataaggcactgaaagtt
ggtcagaatcttaagtttgaccaaagcatgttggcacgttatggcattgatctgcgtggt
attgcttttgataccatgttggaatcttatgttttagacagtgttgccggcagacatgat
atggatagcttagcggagcgctatctcaaccataagactattactttcgaagagatcgcc
ggtaaaggtaaaaaccaacttaccttcaaccaaattgcgttagagcaagctgggccttat
gcggcagaagatgcagacgttacactacagttgcacttggtgttgtggccgaagttacag
caaagtgaaggactcaaacgggtattccaagaaattgagatgccgttactgccaattttg
tcccgtatcgagcggacaggtgtattgattgaccagaatatattggtggcgcattccaaa
gaactgactattcgtcttgatgagctggaaaaacaagcgcatgaattggctgaagagcct
tttaatctcgcctcgccaaagcaattacaggttattttgtatgaaaaacaaaaactacct
atcttgaagaaaacccctggcggcgcggcttcaactaacgaagaggtactggccgagttg
gcgctggattatcctctgccgaaggttattcttgagtatcggggcttagcgaagctgaaa
agtacctataccgataaactgccgttgatgattaatccggtttcagggcgagttcatacc
tcttatcatcaggctgtaactgccaccgggcgtttatcttcccgtgatcctaacttgcaa
aacattccggtgcgaaatgaagaggggcgtcgtattcgtcaggccttcattgcgccagaa
ggctaccgcatcatggcagctgactactcccagattgagctgcgtatcatggctcatttg
tcgcaggataaagggttattggcagcatttgctgctggtaaggatatccaccgcgcgact
gcggctgaagtctttggcttatcactggaaaaagtcacaaacgagcaacgccgcagtgcg
aaagccatcaactttggtttgatttatggtatgagtgcatttggtttggcgcgacagctg
aatattcctcgtggggaagctcagcgctatatggatctctattttgagcgctatcctggt
gtgttggaatatatggagcgcacccgcaaacaagccgccgaacaaggttatgtcacgact
ctggatggccgtcgcctctatttacctgatattcactcacgtaatgctactcgtcgcaaa
gccgcagaacgtgaagctatcaatgcgccgatgcaagggacggcagctgatattattaag
cgcgcaatgattgccgtggatgcctggttacagcaacaacctgagcctttggtgcgggtc
atcatgcaagtacacgatgaattagtatttgaagtgcatgaaagtgtattggaaagcgcc
gaacagaagatccgcgaactgatggaacaaagcatgcaactggctgtgccattaaaagtt
gatgtcggtgtgggttataactgggatcaagctcattag
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