Yersinia enterocolitica 2516-87: CH48_1735
Help
Entry
CH48_1735 CDS
T03644
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH48_1735
Enzymes [BR:
yet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CH48_1735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
RIP
Motif
Other DBs
NCBI-ProteinID:
AJJ26543
UniProt:
A0A0E1NBL8
LinkDB
All DBs
Position
complement(1940661..1942655)
Genome browser
AA seq
664 aa
AA seq
DB search
MFQDQDTSILNTYFGTHSPFWRLAFDSQALELSAIKEIANIAIPLNSVQTMKIRGLTGIT
ASLDIEIEIYGHPLHLHLVGRKINDKEWGGTASAYADTESVARDLVMGLSFAEQVVSEAN
SVIVILDKDGCVQRFNHLSEEYTGKKEQDVIGKNVYDLFMTAKEGASSRKNIEGFFQRGA
SYEAERWVNTVKGKRLFLFRNKFVHSGSGKNERYLICSGTDITKERRAQERLRILANTDM
ITGLPNRHAIHERINSAIQTRGDSSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLAIL
SCLGDNEMLARLGGDEFIVLVENATLNLLETTTQRILNRMKLPFRIGLIEVYTGCSIGIA
LCPEHGDTLENIIRSADTAMYTAKEHGKQTYSIFSQQMNKKVSEYVWLDTNLRKAIEQHQ
LQIFYQPKISTKTGKVLGVEALVRWLSPERGLIAPQEFISYAEESGLIRPLGKWVLQTSM
QQAVDWKKRGINLRIAVNVSARQLIDEAIVTSFIESLEACELESSLVDVELTESCLIDNE
DAAINIMKQLRHLGAQVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRHIDTNPISQSLV
RAIIVVAEALKMQVIAEGVETKEEEEFLDSIGVDEKQGFLYAKPMPADKLEHWLVTQHPH
LLLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagaccaagacacgtcgatcctcaatacctactttggtactcatagcccattt
tggcggcttgcctttgatagccaggctttagagctgtcggcaattaaagagatagcaaat
attgcgatacctcttaattctgttcaaacaatgaaaatccggggcttaaccggtattacc
gccagtttagatattgaaattgaaatttatggtcacccccttcatttgcatcttgttggc
cgaaaaattaatgacaaagagtggggaggaacagcctcagcctatgccgatactgaatct
gtcgctcgtgatttggttatgggcctttcttttgcagaacaggttgtttctgaagctaac
tcagtgattgtgattctcgataaagatggctgcgtacagcgatttaaccaccttagcgag
gaatataccggtaagaaagagcaggatgttattggcaaaaatgtttacgacttatttatg
accgccaaggaaggagcctcatcacggaagaatattgaggggttttttcagcgtggtgca
tcttatgaagcggaacgttgggttaataccgtcaaagggaagcgtctcttcttattccgc
aataaatttgttcacagcggtagcggaaaaaacgaacgctatcttatctgctccggcact
gacattaccaaagaacgacgcgcccaagagcgccttaggattttggctaataccgatatg
attaccggtttgcctaaccgtcatgccattcatgagcgtattaacagcgcaatccaaacc
cgcggtgacagctcagtgggtattatttatctcgatctcgataacttcaaaaaagtaaat
gaccactatggtcatatgtttggtgatcgattactgaaagatgtctcgctggcaatttta
agttgcttgggtgacaacgaaatgcttgcccggttaggaggggatgagtttattgttctg
gtcgaaaacgccaccttgaatttgctggaaacaaccacacagcgaattctcaatcgcatg
aaattgccattccgaattggattgatcgaggtatataccggctgttcaattggcattgca
ctatgcccagagcatggtgatacgctggaaaatattatccgcagtgcggatacagccatg
tataccgcgaaggaacatgggaaacaaacctattccatcttctcgcaacaaatgaataaa
aaagtatccgagtatgtttggctcgataccaatttacgcaaagctatagaacaacatcaa
ttacaaatcttttaccaaccaaaaatatccaccaaaacgggaaaagtactcggtgtcgaa
gctctcgtcagatggctatcgcctgaacgaggtttaattgctcctcaggaatttatctca
tatgcggaagagtctgggcttatcaggcccttgggtaaatgggtactacaaacgtctatg
caacaggcagtggattggaaaaaacgtggaattaacctacgaattgcagtcaatgtttct
gcccgacaattaattgatgaagctatcgtcaccagttttattgagtctcttgaagcctgt
gagttggagtctagcttggtcgatgttgaattaactgaaagttgcttaattgataatgaa
gatgccgctatcaatataatgaagcagctacgccacttaggtgctcaagttcacttagat
gattttggtactggttattcttcactctcccagttagcgcgcattcctatagatgccatt
aaactggatcaaagttttgttcgccatattgacactaatcctatttcacaatctttggta
agagccattattgttgtcgccgaggcactaaaaatgcaagtcattgccgaaggagtggaa
acgaaagaggaagaggaattcctggattctatcggcgttgatgagaaacagggattcctt
tacgccaaaccaatgcccgcagataaactggagcattggctggtaacacaacaccctcac
cttttactggattag
DBGET
integrated database retrieval system
