Yersinia enterocolitica 2516-87: CH48_1860
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Entry
CH48_1860 CDS
T03644
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH48_1860 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yet03021
]
CH48_1860 (rho)
03019 Messenger RNA biogenesis [BR:
yet03019
]
CH48_1860 (rho)
Transcription machinery [BR:
yet03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CH48_1860 (rho)
Messenger RNA biogenesis [BR:
yet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CH48_1860 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AJJ27874
LinkDB
All DBs
Position
2089944..2091203
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctggcccggatgcgtaaacaagatattattttctctatccttaag
cagcacgcgaaaagtggagaagatatcttcggtgacggtgtgttggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctacctcgccggtcccgacgacatctac
gtatccccaagccaaattcgccgtttcaacctccgtactggtgataccgtcgccggtaag
attcgtccacctaaagaaggtgagcgttactttgccttgttgaaagttaacgaagttaac
tatgacaaaccggaaaatgcccgtaacaaaatcctgttcgaaaacttaaccccattacat
gccaactctcgtctgcgcatggaacgtggtaacggttcgactgaagatttaactgctcgc
gtccttgatttggcatcgccaatcggtcgtggccagcgtgggctgattgttgctccgcca
aaagcgggtaaaaccatgctgttgcagaatattgcgaccagcattgcttacaatcaccct
gattgcgtattaatggtcttgttgattgacgagcgcccggaagaagtgaccgagatgcaa
cgtctggttaaaggtgaagtgattgcttccactttcgacgagccagcatctcgccacgtt
caagttgctgaaatggttatcgagaaagctaaacgtctggttgagcataaaaaagacgtt
atcatcttactggattcgattactcgtttggcccgcgcatacaacaccgtggtacctgct
tcaggtaaagtgctgaccggtggtgtggatgctaacgccttgcatcgtccaaaacgcttc
tttggtgccgcacgtaatgttgaagagggcggtagcctgactatcattgccaccgcgttg
gttgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggcaac
atggaactgcacttgtcgcgcaaaattgcagagaagcgtgtgttcccagccattgatttc
aaccgctctggtacacgtaaagaagagctactgacaaccacagaagagttgcaaaaaatg
tggatcttacgtcgtatccttcatccaatgggtgaaatcgatgcaatggagttcctcatc
agcaaattggcaacagcgaaaaccaacgatcagttcttcgataacatgagacgttcgtag
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