Yersinia enterocolitica 2516-87: CH48_1892
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Entry
CH48_1892 CDS
T03644
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03420
Nucleotide excision repair
yet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH48_1892 (uvrD)
03430 Mismatch repair
CH48_1892 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_1892 (uvrD)
Enzymes [BR:
yet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH48_1892 (uvrD)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH48_1892 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CH48_1892 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJJ29070
UniProt:
A0A0E1NJ75
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All DBs
Position
2122535..2124697
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAQGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETADMPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRRMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggccgcg
ccacgctgcaacctgttggtactggccggtgcgggcagtggtaaaacacgggtgctggtt
catcgtattgcctggctgttgtcggtagaaaatgcctccccgtattcgattatcgcggtg
acctttaccaataaagcggcggccgaaatgcgccaccgtattgagcatttgattggcacc
agtcagggcggcatgtggattggcactttccacgggttggcgcaccggttgttgcgtgct
caccatatggatgccaatctgccgcaagatttccaaatcctcgacagcgacgaccaactg
cggttattgaagcgcttggttaaggccctgaatttagatgaaaaacaatggccaccacgt
caggcaatgtggtacatcaacggcaaaaaagacgaaggtctacgtccgcagcatattgag
agctacggtaacccggttgaagccacttggttgcgtatttatcaggcctatcaggaagcc
tgtgaccgcgcgggcctggtggattttgccgagctattattgcgtgcacatgagctgtgg
ctaaataagccgcacattctgaatcactatcgcgagcgctttaccaacattctggtggat
gagttccaggataccaacaacattcaatatgcctggattcgcctgctggcgggggatcgc
tccaatgtgatgattgtcggtgacgatgaccagtcaatttatggttggcgcggggcgcag
gtggagaatatccagcgcttcctgaaagattttcccggcgctgaaaccatccgattggag
cagaattatcgttcgaccagcaatattctgacggcggcaaacaccctgattgctaataat
gacggccgcatgggtaagaacttgtggactgatggggcgcaaggcgagcctatctcgctc
tattgtgcttttaacgagttggatgaagcccggtttgtggttaatcgcatcaaagcctgg
caagacaacggcggcgcgctgaatgattgcgccatcttatatcgcagtaatgcccaatcg
cgtgttttggaagaggccttgttacaaacggcgatgccgtaccgtatttatggtggtcag
cgcttcttcgaacgtcaggaaatcaaagatgcactggcttatctgcgcctgatttccaat
cgtaacgatgatgctgcttttgagcgggtggtgaatacgccgactcgtgggattggtgat
cgcacattagatgtgattcgacaaaccgcgcgtgaccgtcagttaaccttatggcagtca
acccgtgccatgttgcaggaaaaagtgctggcaggacgtgcggcttctgcgctgcaacgt
tttgtcgaactggtggattcactggcgcatgaaaccgctgatatgccactgcatgtccaa
actgatcgcgtaattcgcgattctggtttgtggtcgatgtatgagcaggaaaagggcgaa
aaaggtcaggcgcgtgttgaaaaccttgaagaactggtcaatgcgacccgccaatacagc
tatcaggatgaagatcaggatctgatgccactacaggcatttctttctcatgcggcgctg
gaagccggtgaggggcaagcagatgcctatcaggatgcagtgcaactgatgactctccat
tcagcaaaagggttggagttcccgcaggtatttatcgtaggtatggaagagggcatgttc
ccaagtcagatgtcactggatgaaggcgggcgtctggaagaagaacggcggctggcctat
gttggggtcacccgcgcgatgcagaaactgacactctgttatgccgagagccgccgtttg
tacggcaaagaagtgaatcatcggccatcacgttttatcggcgaattgccgcaagagtgc
gtcgaagaagtgcggctacgcgcgacggtctctcgcccggtaaaccaccgtagaatgggg
acgccaatgaacgaaaatgacagtggcttctcactgggccagcgggtgcgacaccctaaa
tttggtgaaggcacgatagtcaatttggaaggcagcggtgagcacagtcgattgcaagta
gccttccccggtgaagggattaagtggttggtggcggcttatgccagactagaagccgtc
taa
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