Yersinia enterocolitica 2516-87: CH48_1966
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Entry
CH48_1966 CDS
T03644
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet00071
Fatty acid degradation
yet00280
Valine, leucine and isoleucine degradation
yet00310
Lysine degradation
yet00362
Benzoate degradation
yet00380
Tryptophan metabolism
yet00410
beta-Alanine metabolism
yet00640
Propanoate metabolism
yet00650
Butanoate metabolism
yet00907
Pinene, camphor and geraniol degradation
yet00930
Caprolactam degradation
yet01100
Metabolic pathways
yet01110
Biosynthesis of secondary metabolites
yet01120
Microbial metabolism in diverse environments
yet01200
Carbon metabolism
yet01212
Fatty acid metabolism
Module
yet_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CH48_1966 (fadB)
00650 Butanoate metabolism
CH48_1966 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CH48_1966 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CH48_1966 (fadB)
00310 Lysine degradation
CH48_1966 (fadB)
00380 Tryptophan metabolism
CH48_1966 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CH48_1966 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CH48_1966 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CH48_1966 (fadB)
00930 Caprolactam degradation
CH48_1966 (fadB)
Enzymes [BR:
yet01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CH48_1966 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CH48_1966 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CH48_1966 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CH48_1966 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJJ26023
LinkDB
All DBs
Position
complement(2202964..2205153)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLKLHWLENGIAELVFDAPGSVNKLDTQTVANLGEALVVLEKQSELKGLLLRSA
KAAFIVGADITEFLSLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLVDAVVASEKLVDAALSILKQAIDGKLDWQAARRPKLEPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKFGRAEALILETNSFVPLAGSNEARALVGIFLNDQYVK
GQAKKLSKGVSAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYAGIERAQVIVEAVVENPKVKAAVLAEIETLIGE
ETVLASNTSTIPIDQLAKPLKRPENFCGMHFFNPVHRMPLVEIIRGTKTSDKTIAAVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAVGFPERMNKDYRDAVDAMFDNQRFGQKNGQGFYRYTQDTKGKP
RKENDEQVDALLAQVSQPLQKFSDDDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSANYVEMAQRYTHLGALYQVPPGLRAKAEHNESYYPVAAAL
LDVSISQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactaaagcttcactggctggaaaacggcattgccgagttg
gtgtttgatgcaccaggttcagttaataagctggatacccaaactgtagccaatctgggc
gaagccttggttgtgttagaaaaacaaagtgaactcaaagggttgctattacgctcagcc
aaagcagcctttattgtcggtgccgatatcaccgagtttctatccctgtttaacgagccg
ccagaaaagttgcatcaatggttggttttcgccaacgatattttcaatcgtttggaagac
ttaccagtgccaaccattgcagcaatcaatgggtatgcactgggtggcgggtgtgaatgt
atcttagcgactgattttcgcgtggcctcgccagaagcacgtatcggtctaccggaaacc
aagctcggaattatgccgggttttggtggttcagttcgcttgccgcggctattaggcgct
gacagtgcgttggaaattatcgcagctggcaaagatattattgccaaagatgccttaaag
gttgggctggttgacgccgttgtcgcctccgaaaagttggtcgatgccgcgttaagtatc
ttgaaacaagcgattgacggaaaactcgactggcaagctgcacgtcgtccgaaattagag
ccattgaagctcaatccgaccgaagccgcaatgtgctttaccattgccaaaggcatggtt
atgcaagtcgccggtaaacactatccggctcccttgactgccgtcaaaactattgaggcc
gctgcaaaatttggccgcgctgaagcattgatactggaaaccaatagttttgttccctta
gctggttccaatgaagcgcgtgcattagtcggtattttcttgaatgaccaatatgttaaa
ggtcaggctaaaaagctgtccaaaggtgtcagcgcccccaaacaggccgcagtgctgggt
gccgggattatgggcggtgggattgcctatcagtcggcactgaaaggtgtgccggtcatc
atgaaagatattaatgacaaatccctcacattagggatgaatgaagcggccaagttgctg
aataagcagctggagcgcggcaagatagatggcctgaaaatggcaaatatcttagcaacc
atccagccaacattagattatgccggtattgaacgcgctcaagtcatcgtggaagcggtg
gtagaaaatccaaaagtcaaagcggcagtcctggcagagattgaaacacttatcggcgaa
gaaactgttctggcttctaacacttcgacaattccgattgatcagctcgccaaacccctt
aaacgcccagaaaacttctgcggcatgcatttcttcaatccagtgcaccggatgccattg
gttgaaattattcgtggcaccaaaacttcagataagactatcgccgcggttgtggcatac
gccacgcaaatgggtaaaaccccgattgtagtcaatgattgcccaggcttctttgttaac
cgcgttttgttcccgtatctggctggattcggcatgttagtcagagacggcgcggacttc
cgccaaattgataaagtgatggaaaagcaatttggctggccaatgggccctgcttatcta
ttagatgtggtgggcattgataccgcgcaccatgcacaggcagtgatggccgttggtttc
cctgagcgcatgaataaagattatcgcgatgcggttgacgcgatgtttgataaccaacgg
tttggtcaaaagaatggccaaggcttctaccgctatacccaagacactaagggtaaaccg
cgtaaagagaatgacgaacaagtagatgcattactggcacaagtcagccagccgcttcag
aaatttagcgatgacgatattatcgcccgtaccatgatcccgatgatcaatgaggtggtg
cgatgcctggaagaaggcattattgccagcccggctgaaggtgatatggcgttggtatat
ggccttggattccctccattccacggcggcgtcttccgttaccttgataccatcggcagt
gcaaattatgtcgaaatggctcaacgctacacccatcttggggcgttgtatcaagtcccg
ccgggattaagagccaaagccgaacataacgaaagctattatcctgtggcagcagcgctg
ctcgatgtttctatcagtcaaccggcatga
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