Yersinia enterocolitica 2516-87: CH48_2654
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Entry
CH48_2654 CDS
T03644
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_2654 (sbcD)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH48_2654 (sbcD)
Archaeal homologous recombinant proteins
CH48_2654 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AJJ28595
UniProt:
A0A0E1NHV8
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All DBs
Position
complement(2969862..2971100)
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQHFFTKSRAAEHQAFLHWLIEQIKENQVDALIVAGDIFDTGAPPSYAR
ELYNRFVVELQPTNCQLVVLGGNHDSVSTLNESRGLLSYLNTTVISCASSNLDQQVIILK
NRQNHPAALLCAIPFLRPRDLVTSQAGESGGQKQLALQEAIAAHYQALYQRAVELRTELG
LPLPIIATGHLTTVGVTTSDSVRDIYIGTLDAFPAHAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFAQQALASVTPIFIPQFQPMQLIKGDLAQIEQQLT
KFADHQGLPVWLDIEVATQDYLTDIQRRIQALAAELPVEVVLLRRSKEQRNNSIERQEKE
TLNELSVTDVFERRLALEADLAAPRQERMRQMFNLVVEDITQGKDATEEQSA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatacctctgactggcatttgggccagcatttctttaccaaaagccgt
gcggctgaacatcaggcattcctgcactggctcatagaacagatcaaagaaaatcaggta
gatgcgctgattgtggcgggtgatatttttgataccggcgccccacccagctatgcacgt
gagctatataaccgtttcgtggttgaactacagccgacgaactgccagttggttgttctg
gggggcaaccatgattcagtatcaacgctgaatgaatctcgcggcttgctttcttatttg
aataccacagtcatttcctgcgccagcagcaatttggatcaacaggttattattttgaaa
aaccgccaaaatcaccctgcggcgctgctgtgcgcgattccctttttacgtccacgggat
ctagtcaccagtcaggcgggtgaatccggtggtcagaaacaactggcgttgcaggaagca
attgctgcccattatcaggcgctttatcagcgagccgtcgagctgcgtaccgagttaggc
ctgcccttgccgattattgctaccgggcacctaactacggtgggggtcactacctcggac
tcggttcgtgatatttacatcggcacattggatgctttcccggcccacgctttccccccg
gcagattatattgctctgggccatattcaccgtgctcagcaggtagcaaaaaccgaacat
atccgttatagcggttcgccaattgccctgagttttgatgagttgagcaaagagaaaagt
gtttatctggtggagtttgcccagcaggcattagcctctgtgaccccaatcttcattcca
caatttcaaccaatgcaattaatcaaaggcgacttagcgcaaattgagcaacagttgact
aaatttgccgaccaccaagggttaccggtgtggctggatatcgaagttgccacacaagat
tatctcactgatattcaaagacgaattcaggcattagccgcagaactccccgttgaggtg
gtactcttacgccgcagcaaagagcagcgtaataacagtattgagcggcaggaaaaggaa
acactcaatgaactgagtgtcactgatgtatttgaacgccggctggcgctagaggcggat
ttagccgcaccacgccaagagcgcatgcgacagatgtttaatctggtggttgaagatatc
acgcaaggtaaagatgccacagaggagcaatctgcatga
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