Yersinia enterocolitica 2516-87: CH48_2816
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Entry
CH48_2816 CDS
T03644
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03030
DNA replication
yet03430
Mismatch repair
yet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH48_2816 (holA)
03430 Mismatch repair
CH48_2816 (holA)
03440 Homologous recombination
CH48_2816 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yet03032
]
CH48_2816 (holA)
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_2816 (holA)
Enzymes [BR:
yet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH48_2816 (holA)
DNA replication proteins [BR:
yet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH48_2816 (holA)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH48_2816 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AJJ27471
LinkDB
All DBs
Position
complement(3144044..3145078)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRVYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVAATHDFSEHFSFALDAHTE
WENIFSLCQALSLFASRQTLLLSFPDSGLTAPMNEQLVKLSGLLHPDILLILRANKLTKA
QENSAWFKALSPNSVFVSCQTPEQAQLPRWVSTRAKSLNLNIDNAAVQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALLAGKSKRAWHILQQLQQED
SEPVILLRTLQRELLQLLTLKRRMEQVPLRTLFDQFKVWQNRRPMMTQALQRLSMPQLQQ
AVRLLSQIEVRLKQDYGQSIWPELETLSMLMCGKILPESFFDAQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattcgagtttatcctgaacaacttgtcgcgcagctccatgaggggctgcgcgcttgt
tatctgttgtgtggtaacgaacccttgttattgcaggaaagtcaggaccatattcgccgt
gtggcagcaacgcatgatttcagcgagcatttcagttttgcgctggatgctcacactgaa
tgggagaatatctttagcctttgtcaggcgctgagtttatttgccagccgacagacactg
ctattgagcttccctgacagtgggttaaccgcaccgatgaatgaacaattggtcaaatta
tccggccttttgcacccagacattttgttgatattacgtgccaataagctaacaaaagcg
caagaaaacagcgcatggtttaaggctctcagcccaaattcggtgttcgtcagttgccag
acaccagaacaggctcaactccctcgttgggtaagcacacgcgccaaaagcctaaattta
aatattgataatgccgccgttcagctactttgttactgctatgaaggtaacctgctggcg
ttatcacaggcattggaacgcctatcattactctatccggacggtaaattaacactgccc
aaagtagagcaagccgtcaacgatgccgcacatttcaccccttaccactggcttgatgct
ttgctggcagggaaaagcaaacgtgcctggcatatcctgcaacaattacagcaggaagac
agtgagccggttatcttgctacgcacactccagcgcgagctattacaactgctaacacta
aagcgccggatggagcaggtgccactgcgaacattattcgatcaatttaaagtgtggcaa
aatcgtcgtccgatgatgactcaagcgttacaacgtctttcgatgccacaactgcaacag
gccgtacgtttattgtcacaaatagaagttcgcctgaagcaggattacggtcagtcaatc
tggccggagttagaaacactatctatgctgatgtgtggaaaaattttacctgagagcttt
tttgatgcccaataa
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