Yersinia enterocolitica 2516-87: CH48_2867
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Entry
CH48_2867 CDS
T03644
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_2867
Enzymes [BR:
yet01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CH48_2867
DNA repair and recombination proteins [BR:
yet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CH48_2867
Prokaryotic type
CH48_2867
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJJ29305
UniProt:
A0A7U0AX01
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All DBs
Position
3208186..3209631
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AA seq
481 aa
AA seq
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MATHLVWFRNDLRVTDNLALHTACQDPQATVIAVFIATPAQWAAHDMAPRQAAFLLQNLQ
LLQDALAARAIPLHYHQCDDFKDSITWLDDFCQQQQVDALFYNHQYELNERMRDEALVVQ
MGHRAIACHGFHDAVLLPPGSILTGNNEMYKVFTPFRRAFIQRLMMSDCRSVPAPKARTT
AAVIPSQPLAPFDYPQQPVDSQLFPAGEEAALQRLRRFCREDVQDYQQQRDFPAVAGTSC
LSPYLALGILSPRQCVNRLRAECPEVLENADGGAFIWLNELIWREFYRHLLVAYPRLCQH
HPFIGWTDAVIWNHSEQQLIAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMISASFLVKD
LLIDWRQGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDQDGVF
IRRWLPELAAVPDSDIHQPWRWAERQQQSLDYPPPLVEHKQARLATLAAFEAAKRDGSKD
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcatctggtctggtttcgtaatgacttacgcgtcactgacaacttggcattg
catacggcgtgtcaggacccacaagcgacagtgattgcggtgtttattgcgacccccgca
caatgggctgcgcatgatatggcaccgcggcaggccgcatttttgctgcaaaacctgcaa
ttgctacaggatgcactcgccgcgcgggcgatcccactgcactatcatcagtgtgatgat
tttaaggattcgattacttggttggatgatttttgtcagcaacagcaagtggatgcactg
ttttataatcatcagtatgagttgaatgagcggatgcgcgatgaggcattggtggtgcaa
atgggtcatcgtgcgattgcttgtcatggttttcatgacgcggtgttattgccgccgggc
agtatcctgacaggtaataatgaaatgtataaagtgtttactccgtttcgccgtgctttt
atccagcgtttaatgatgagtgattgccgcagtgtcccagccccgaaagctcgtaccacc
gcagcggtgatcccctcacagcccttggctccgtttgattacccgcaacaaccggtagac
agccagctatttccggcgggtgaagaagcggcgttacagcgcttgcgccgtttttgtcgc
gaagatgttcaggactatcaacagcaacgtgattttcccgctgtggcgggcaccagttgc
ctgtcaccttatcttgcgctgggaatactttcaccccgtcaatgtgttaatcgcttgcgg
gcagaatgcccggaggtgttggaaaatgccgatggcggggcttttatttggcttaatgaa
ttgatctggcgtgaattttatcgccatttattggtagcttatccacgattatgccagcat
catccctttattggttggactgatgcagtaatatggaatcactcggaacagcaattaatc
gcctggcagcaagggcgaacaggttatcctattgtcgatgcagccatgcggcaactcaat
gaaaccggttggatgcataatcgcctgcgaatgatcagcgccagttttctggttaaagat
ttgctcatcgactggcgacaaggcgaacgctattttatgtcgcaactgctggacggtgat
ttggctgcaaataatggcggctggcaatgggctgcttctaccgggacagatgccgcacct
tactttcgtatctttaaccccaccacccagggtgagcgttttgaccaagacggcgtgttt
attcgccgctggttgcctgaattggcggcagtaccagacagtgatatccatcagccgtgg
cgttgggccgagcggcaacagcaatcattggattacccaccaccgctggtggagcataag
caggccagattggcgacactcgcggcgtttgaagccgctaagcgggatggcagcaaggat
ccctaa
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