Yersinia enterocolitica 2516-87: CH48_3537
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Entry
CH48_3537 CDS
T03644
Name
(GenBank) SIS domain protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yet03000
]
CH48_3537
Transcription factors [BR:
yet03000
]
Prokaryotic type
Helix-turn-helix
Other families
CH48_3537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
MarR
HTH_29
HTH_24
Nuc_deoxyri_tr2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AJJ26475
LinkDB
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Position
complement(3890553..3891422)
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AA seq
289 aa
AA seq
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MNTLENIQNNLDLLSKSERKVAEVILASPQTAIHSSIATLAKLANVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVSAYTGKIFESTMASLDMVKNNLDIAAINR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDIVMQRMSCMNSSEGDVVV
LISHTGRTKSLVELAHLARENDATVIAITTRDTPLANEATLPLLLDVPEDTDMYMPMVSR
IAQLTLIDVLATGFTLRRGAKFRDNLKRVKDALKESRFDKGSARINSGE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctggaaaatatccaaaataatctggacctcctgagcaaatcggaacggaaa
gtcgccgaggtaatcctcgcctccccacaaacggccatccactcaagtattgccaccctc
gccaaattggcaaacgtgagcgaacccaccgtaaaccgcttttgccgtcgattagacacc
aaaggttttcctgattttaaacttcatttggcacaaagtctggctaatggcacaccttat
gtgaatcgaaatgttgaagaagatgatagtgtatccgcttacacggggaaaatattcgaa
tcgaccatggctagcctggatatggtgaagaataatttagacattgcagccattaatcgg
gcggtagatttattgacgcaagcgaagaagatttcgttcttcggccttggcgcatctgct
gccgtggcccatgacgcgatgaataaattctttcgcttcaatattcctgtgatttatttc
gatgatatcgttatgcaacgtatgagttgtatgaattccagtgaaggtgacgtcgtggta
ttgatttcccacactgggcgaacaaaaagcctggtagagttggctcacttagctcgtgaa
aacgatgccactgtgattgccattaccacacgcgatactccgctggccaatgaagcaaca
ttaccgctgctgctggatgtgccagaagatactgatatgtatatgccgatggtgtcacgg
attgctcaattgaccttaattgatgtgttagcaaccggatttacactgcgtcgcggtgcg
aaattcagagataacctgaaacgggtcaaagatgcattgaaagaatcgcgtttcgataaa
ggttcagcgcgtatcaatagcggtgaataa
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