Yersinia enterocolitica 2516-87: CH48_3656
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Entry
CH48_3656 CDS
T03644
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CH48_3656
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yet01002
]
CH48_3656
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yet01011
]
CH48_3656
Peptidases and inhibitors [BR:
yet01002
]
Cysteine peptidases
Family C82
CH48_3656
Peptidoglycan biosynthesis and degradation proteins [BR:
yet01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CH48_3656
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
AJJ27021
UniProt:
A0A0E1NF35
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All DBs
Position
4020676..4021743
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AA seq
355 aa
AA seq
DB search
MKRALTLIGMLFATCLAGSITAANATEYPLPPANSRLIGENTTYTVPNDGRPLEAIAADY
KIGLLGMLEANPDADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPKGQNKV
IVYPIGIGQLGRNTPTMTTSVSQKIPNPTWTPTANIRKHYAAEGVTLPAVVPAGPENPMG
LFAMRLAAGGGEYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFKAVPKGTRVQIINEPV
KYSVEPDGKRYVEVHQPLSRVDSDDPQTMPIAISSSLQKFINDSQTDAQVVQEAIVRRAG
MPVIVTVGETAPVQAPAAVAPQSEQQAQPQSEGQQPTEQEIPKLVQPGPVYSAAN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcattaactttgattggtatgttattcgcaacttgtctggcgggaagtatt
accgctgccaatgcgaccgagtatcctctgccgccagccaatagtcgtctgattggtgaa
aatactacctatactgttccaaatgatggtcgtccactggaggctattgctgccgattat
aaaatcggtttgttgggaatgctggaagcaaacccagacgctgacccgtatttgccgtta
cccggttcagtgttaactatcccgactcagatgttgctgcctgataccccacgtgaaggt
atcgttatcaacctggccgaactgcgtctttattattaccctaaaggccagaacaaagtc
attgtatacccaatcggtatcggccagttggggcgtaatactccaacgatgacaacttct
gttagtcagaagatcccgaacccaacctggacaccaacggccaacatccgtaagcactac
gcagctgaaggtgtgactttgccagcagtcgttcctgcgggtccagaaaacccaatgggt
ctgtttgccatgcgtttggctgccggtggcggtgaatacttgatccacggaaccaacgct
aacttcggtatcggtatgcgtgtcagctccggctgcattcgtttacgtccagatgatatt
gaagcgctgttcaaagccgtaccaaaaggcacccgcgttcagatcatcaacgaaccggtt
aaatattccgttgaaccagatggtaagcgttatgtggaagtccatcagccgttgtctcgt
gtagacagtgatgatccgcaaacgatgccaattgctatcagtagcagcctgcagaagttt
atcaatgacagccagactgatgcacaagtggtgcaggaagcgattgtacgccgtgctggc
atgccagttatcgttactgtaggtgagacagcccctgtacaagctccggctgctgtagcc
cctcagagcgagcaacaggcacaaccgcagagcgaaggtcagcaacccactgaacaagaa
attcctaagttggttcagcctggcccggtttactccgcagcgaactaa
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