Yersinia enterocolitica 2516-87: CH48_4003
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Entry
CH48_4003 CDS
T03644
Name
(GenBank) deoR-like helix-turn-helix domain protein
Organism
yet
Yersinia enterocolitica 2516-87
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_24
HTH_20
MarR_2
GntR
Fe_dep_repress
MarR
HTH_23
Rrf2
HTH_AsnC-type
HTH_PafC
TrmB
HTH_IclR
HTH_Mga
Sigma70_r4
PaaX
HTH_28
AbiEi_4
HTH_Tnp_1
HTH_36
Put_DNA-bind_N
HTH_Tnp_ISL3
HTH_38
HTH_1
DUF746
DUF1670
DprA_WH
CggR_N
Motif
Other DBs
NCBI-ProteinID:
AJJ26587
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Position
4389534..4390313
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AA seq
259 aa
AA seq
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MIPVERHQQILALVAERGVVSIAELTERLGVSHMTIRRDVQKLEEQGAVLSVSGGVRSTE
RLAAEPSHQDKTLMYSSQKNAIGMAAALHIPRNSCIYLDAGTTTLALARQLEARDDLLVV
TNDFVIANFLIESCQCKMIHSGGTLCRENRSCVGDAAARALRNLSIDIAFISASCWGPRG
ISTPDEDKVVVKRAVSEVSSKRVLLADASKYGKIATYLALPLIDFDAVITDTGLASTAHE
ELATKEIELIIAPTLRQSD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgattcccgttgaacgtcaccaacagatactggcactggttgccgagcgtggcgtcgtc
agcattgctgaactgactgaacgtttaggtgtatcgcacatgactattcgtcgtgacgtg
caaaaactagaagaacaaggtgcagtgttatccgtttcgggtggggttcgttcgactgag
cggctggctgctgagccctcccatcaagataaaacgctcatgtacagcagccagaaaaac
gccattggtatggcggcagcgctgcatattccacgtaatagctgtatttatcttgatgcc
ggaaccaccacactggcgttggcacggcaactggaagccagggatgatttattggtggtc
accaatgactttgtcatcgctaattttttgattgaatcctgccaatgtaaaatgatccat
tcaggtggcacattgtgtcgcgaaaaccgttcttgtgtcggtgatgccgccgcccgtgcg
ctacgaaatttatccattgatatcgcctttatttcagcatcctgctgggggcctcgcggc
atttcaacaccggatgaagacaaagttgtggtgaaacgggcagttagtgaggttagcagc
aagcgcgtgctactggctgacgcatcaaaatacggcaagattgccacttatttagcctta
cctcttattgactttgatgccgtgattactgataccggtttggcgtctacagcccatgaa
gaactagccactaaagagattgaattgattatcgccccaaccctgcgtcaatctgattga
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