Yersinia enterocolitica 2516-87: CH48_4038
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Entry
CH48_4038 CDS
T03644
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase dbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yet03009
]
CH48_4038 (dbpA)
Enzymes [BR:
yet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CH48_4038 (dbpA)
Ribosome biogenesis [BR:
yet03009
]
Prokaryotic type
rRNA helicases
CH48_4038 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJJ28096
LinkDB
All DBs
Position
complement(4425909..4427291)
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AA seq
460 aa
AA seq
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MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGI
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDDLKILVLDEADRMLDMGFTDAIDDVIAYTPPQRQ
TLLFSATYPAGIEQISARVQRQPVNVEVDDGDEAPAIEQVFFETTREKRLPLLISVLSHY
QPASCVVFCNTKKDCQSVYEALESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKDLELVVNFELAFDPEVHVHRIGRTGRAGMSGLAVSLCTPQEMTRAHAIEDY
LQMKLKWTPAEQVSRSANTMLEPEMVTLCIDGGRKAKIRPGDILGALTGEASLTAADVGK
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaacttccttttcttccctgacactgcctgctgagcagttgtctaatcttaat
gaacttggctataccgagatgacaccggtacaggccgcagcattaccggcaatcctcaat
gggcaggatgttcgggcaaaagctaaaaccggcagcggtaaaactgcggcattcggcatt
ggtttgctggacaaaattgctgtaggtgagtttgtgactcaggccttggtgctgtgtcca
acccgcgaattagctgatcaggtcagcaaagagttgcgccgattagcacgctttactcag
aacattaaaatcctaaccctgtgtggcggccagccgatgggccatcagttggattctctg
gtgcatgccccgcatatcgtcgtcggcacgccggggcgtattcaggagcatttgcgcaag
aaaacgctggtgctggatgacctcaaaattctggtgctggacgaagccgatcgcatgttg
gatatgggttttaccgatgccattgatgatgtgattgcctataccccgccacaacgccag
acgttgctattttctgccacttacccagccggtattgaacaaatcagtgcgcgggttcag
cgccaaccggtgaatgttgaagttgatgatggcgatgaagcgccagctatcgaacaggtg
tttttcgaaacgactcgtgaaaaacgtttgccattgttgatctcggtacttagtcactac
cagcccgcttcttgtgtggtgttttgtaataccaaaaaagattgccagagcgtctacgaa
gccctggagtcccgtggcatcagtgtgttggcattacacggcgacttagaacaacgtgac
cgtgaccaggtgttggtgcgttttgccaaccgcagttgtcgggtactggttgcaacggac
gttgccgctcgaggtctggatatcaaagacttggaactggtggtcaatttcgaactggcg
tttgatccggaagtgcatgtgcaccgcatcggccgcacgggtcgggcagggatgagtggc
cttgccgtgagtctgtgcacgccacaagaaatgactcgtgctcatgccattgaagattat
ctgcaaatgaaattgaaatggacgccagccgagcaggtgagccgcagtgccaacaccatg
ttggaacctgaaatggtcacgttatgcattgatggtggccgtaaagctaaaattcgccct
ggcgacattttgggtgcgttaaccggtgaagccagtctgaccgctgcggacgtgggtaaa
atcgatatgttccccgtccatgcttatgttgctattcgcaaggccagtgccaaacgcgcg
ctacagcagttacagcaaggcaaaatcaaaggcaaaaactgtaaagctcgtttattaaaa
taa
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