KEGG   Yersinia enterocolitica 2516-87: CH48_4199
Entry
CH48_4199         CDS       T03644                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
yet  Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:yet00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yet02044]
    CH48_4199
Secretion system [BR:yet02044]
 Type III secretion system
  Type III secretion core apparatus
   CH48_4199
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Yop-YscD_ppl_1st Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C T2SSB BON FHA PrgH MORN_2
Other DBs
NCBI-ProteinID: AJJ25701
UniProt: Q01245
Structure
LinkDB
Position
pCD:complement(37901..39157)
AA seq 418 aa
MSWVCRFYQGKHRGVEVELPHGRCVFGSDPLQSDIVLSDSEIAPVHLVLMVDEEGIRLTD
SAEPLLQEGLPVPLGTLLRAGTCLEVGFLLWTFVAVGQPLPETLQVPTQRKEPTDRLPRS
RLGVGLGVLSLLLLLTFLGMLGHGLWREYNQDGQLVEQEVRRLLATAAYKDVVLTSPKEG
EPWLLTGYIQDNHARLSLQNFLESHGIPFRLELRSMEELRQGAEFILQRLGYHGIEVSLA
PQAGWLQLNGEVSEEIQKQKIDSLLQAEVPGLLGVENKVRIAGNQRKRLDALLEQFGLDS
DFTVNVKGELIELRGQVNDEKLSSFNQLQQTFRQEFGNRPKLELVNVGGQPQHDELNFEV
QAISLGKVPYVVLDNHQRYPEGAILNNGVRILAIRRDAVIVSKGKREFVIQLNGGKPR
NT seq 1257 nt   +upstreamnt  +downstreamnt
gtgagttgggtctgtcgtttttatcaagggaagcaccgtggtgttgaagttgagcttcct
catgggcgctgtgtttttggctcagacccgttgcaatcagatattgttctttctgacagc
gaaatagcacccgtgcatttagtgctgatggtcgatgaagaaggtattcgcctaactgat
tctgcagaacctctactacaagaagggcttcccgtgccgttggggactcttcttcgcgcg
ggcacttgtctggaagtagggtttttactgtggacatttgtcgccgtagggcaacctttg
ccagagacgttacaggttcccacgcagagaaaagagccaaccgacaggttacctcgttca
cgacttggggttgggcttggagttctttctttattgttgcttttgacttttttggggatg
ctagggcacggattgtggcgcgagtataaccaggatggacaacttgttgagcaagaagta
cggcgcttgctggcaactgctgcctacaaggatgtcgttttaacatcgcccaaagagggt
gaaccttggttattaactggttatatccaggataatcatgcccgcttgtcactgcaaaat
tttcttgagagccatggcattccattccggcttgaactgcgcagcatggaagaactgcgt
cagggggcagaattcattctgcaacggttgggataccatggaattgaggtttctttagca
ccgcaagcgggatggctacaattgaatggggaagtgtcagaggaaatacaaaagcaaaaa
attgatagcctgctgcaagctgaagtgccagggctgcttggtgtagaaaataaagtgcgg
attgccggtaatcaacgcaagcggcttgatgcattacttgaacaatttggtctggattca
gatttcacggtaaatgttaaaggtgagctgattgaattacgcgggcaagtcaatgatgaa
aaattgagttcatttaatcaactacaacaaacttttcgccaagagtttggcaatcgacct
aaattagaactggtcaatgtcggggggcaaccccagcatgatgaattgaattttgaggtg
caagctatctcgttagggaaagtgccctatgtggtactcgacaatcatcaacgctatcca
gaaggcgccatacttaacaatggcgttcgtattctggctattcgacgcgatgcggtgatt
gtgagtaaaggaaaacgggaatttgtgatccagctcaatggaggtaaacctcgatga

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