Yersinia enterocolitica 2516-87: CH48_47
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Entry
CH48_47 CDS
T03644
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH48_47
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yet03000
]
CH48_47
Transcription factors [BR:
yet03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CH48_47
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AJJ27685
UniProt:
A0A0E1NFA0
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All DBs
Position
complement(52358..53092)
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AA seq
244 aa
AA seq
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MIIDYFDNESINEDIKNYIQRRIKTYGDLCYSYLVMNKKTPLHPTIISNYPLDWVKKYKK
NSYHLIDPVILTAKDKVAPFAWDDNSVINKKSTDSAVFKLAREYNIVNGYTFVLHDNSNN
MATLNISNGSDDSISFDERIEINKEKIQMLLIITHEKMLGLYQSNSDKNENRNTQIERDI
FSPRENEILYWASVGKTYAEISIILGIKRSTVKFHIGNVVRKLGVLNAKHAIRLGIELKL
IKPI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgataattgactattttgataacgaaagtattaatgaagatataaagaactatattcaa
cgcagaataaagacctatggtgatctttgttattcttatttagtcatgaataagaaaacg
cccctgcaccccactattatctctaattatccattggattgggtaaaaaaatataaaaag
aacagttatcatcttattgatccggttattttgacggcgaaagataaagtcgcccctttt
gcctgggacgataattccgttatcaataaaaaatcgacggattccgccgtgtttaagttg
gcccgagaatataatattgttaatggctatactttcgtactccatgataatagtaataat
atggcaacgttaaatatctccaatggaagcgacgatagtatctcttttgatgaacgcatt
gaaataaataaagaaaaaattcaaatgctactcattattacacatgaaaagatgttaggt
ctttaccagagcaatagcgataagaatgaaaatcgaaacacgcaaatagagcgagacata
ttctcgccgagggaaaatgaaattctatattgggccagcgttggtaaaacctatgccgaa
atctcaattatcttaggaataaaaagaagcacagttaaattccacattggcaatgttgtc
aggaaactgggtgttttaaatgccaagcatgcaataaggcttggcatagagttgaaactt
attaaacctatttaa
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