Yersinia enterocolitica 2516-87: CH48_601
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Entry
CH48_601 CDS
T03644
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yet03009
]
CH48_601
Enzymes [BR:
yet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH48_601
Ribosome biogenesis [BR:
yet03009
]
Prokaryotic type
rRNA helicases
CH48_601
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJJ28880
UniProt:
A0A0E1NIQ0
LinkDB
All DBs
Position
688353..689678
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AA seq
441 aa
AA seq
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MTVTNFSELDLDERLIDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RKQTLLFSATLEGEAIREFAERILTEPVELEADPSRRERKKIQQWYYRADNIEHKTALLV
HLLKQPEVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVN
VLVATDVASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLL
GRIGRYLKEPLKPRVIDELRPTSKAPSEKSTGKPSKKVLAKRKELKEAGKEKTKVKVRHR
DAKNVGKRRKPKDKPDTKSVS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgatctcgatgaacgcctgattgacgcattgcgc
gacaaaggctatgagcgcccgactgccattcaagctgcggctattccgccagctatggat
gggcgcgatgtattgggttcggcaccaacaggtaccggcaaaactgccgcctttttgctg
cccgccttgcagcatttgctggatttcccacgcaaaaaatctggcccaccacggattttg
atcctgacgccaactcgtgagttagccatgcaagtggcagatcaagcccgtgagcttgcc
aagcatacccaactggatatcgcgaccatcaccggtggtgtcgcttatatgaaccacgcg
gaagtctttagtgagaatcaggatattgtagtggcgacaaccggccgcttgctgcaatac
atcaaagaagaaaactttgactgtcgggcagtagaaaccctgattctggacgaagctgac
cgtatgcttgatatgggcttcgcacaggatattgaaactatctcggcagaaacccgctgg
cgtaaacagaccttacttttctcagccacgctagaaggtgaagctattcgtgagtttgcg
gagcgcatcctgactgagccggtagagctggaagctgacccatcacgccgtgaacgtaaa
aaaattcagcaatggtattaccgcgcagacaatattgagcacaaaactgccttgctcgtg
catttgctgaagcaaccagaagtacagaaatccattatttttgtgcgtacccgtgaaaag
gtacatcaactggtcagttggttacgcgaagctggaattaatgcctggttccttgagggt
gaaatggttcaggccaaacgtaccgaagccgtgattcgtttaagcgatggtcgggttaac
gttctggttgcaacggatgtggcttcacgcggtctggatatcgacgatatcagccatgtg
ttcaactttgatttgccgctgactgctgacgtctaccttcaccgtatcggccgtactggc
cgtgcagggcgtaaaggggttgctatttccctggttgaagcgcatgaccatttattgctg
ggtagaataggccgttatctgaaagagccattgaagccacgagtgattgatgagctgcga
ccaaccagtaaagcaccgagcgagaaaagcacaggtaaaccgtctaaaaaggttttagcg
aagcgtaaggagctaaaagaagccggtaaagagaaaacgaaagttaaggttcgccatcgc
gatgctaagaatgtgggtaagcgccgtaagccaaaggacaagcccgataccaagagtgtg
agttaa
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