Yersinia enterocolitica 2516-87: CH48_764
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Entry
CH48_764 CDS
T03644
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH48_764 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_764 (recB)
Enzymes [BR:
yet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CH48_764 (recB)
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH48_764 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJJ26026
LinkDB
All DBs
Position
complement(842367..845996)
Genome browser
AA seq
1209 aa
AA seq
DB search
MTSMTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGEAAFRRPLRVEEI
LVVTFTEAATEELRGRIRDNIHELRIACVRGVSDDPMHQALLAEIIDLSEAATDLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPLAI
ARAVSQEWSGPEALLKDLSAYLQGETPKFRQAPGDDETILSRHQQIVVQIEAVKAQWRAA
APELEALISGSGVDKRSYSARYLPNWLEKVGSWAEQETGDYQLPKELEKFRQSVLFEKTK
KGEAPQHDVFHTIDRIFEQPLTLRDLILARAISEIRISVQQEKRQRAELGFDDLLSKLDA
ALQQAGGELLAQSIRTRYPVAMIDEFQDTDPQQYRIFHTLYGGQEECGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLDTNWRSSFPMVQSVNRLFSLVDVPFLFKQIPFINVAP
AQKNKQLSFEIKGKKQPAMSFWLQSGDGVGVSEYQQLMARQCAAQIRDWLTAGQKGLAQL
VTATSSRPVQASDITILVRSRAEAALVRDALSTLAIPSVYLSNRDSVFDTAEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDARMLDELNHDERAWDALVDEFDGYRQHWQRRGVLPM
LREIMAQRHLAENLLATQGGERRLTDLLHLGELLQEAASQLDSEHALIRWLAQQIAQPNH
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVSNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSIGIAPLIKGGRKKQGESDMHLSALGY
LVQQGQAGDAQYLADKLAGLAALADGEISVSQAGQLDETPWQPQQDELPALAARQFSRQI
HDFWRVTSYSGLQQHGSSKSVASQALSVPLQELLPRLDTDAVGEQTLMTEPQLTPHTFPR
GAAPGTFLHDLLEPLDFSQPIEQDWLTEQLQQQGFGEQWSSMLYQWLTDIVQTPLNETGV
TLAQLTPQSKQAELQFYLPIDTLLQARELDTLIKRYDPLSRQCPVLDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTHDAMAQAMAEHRYDLQYQLYTLALHRYLRHRLS
HYDYQRDFGGVIYLFLRGVDKQHPGNGIFSCRPERELIERMDCLFSGGEVGPHISDNSGM
AITGEGTSI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgactccccagcggctggaaccgctaacgctccccttgtatggcgagagg
ctaattgaagcttccgccggtactggtaagacttttaccattggggttctttatctcaga
ttgttgcttggcttaggcggggaggcggcttttcgtcgccctctaagggtcgaggagatc
ctggtggtgacctttactgaggcggcaactgaggagttgagagggcgaatccgcgacaat
attcatgagttgcgaattgcttgcgtaaggggagtcagtgatgacccaatgcatcaagct
ttattagctgaaatcattgacttgagtgaggctgcaactgatttgctggcggctgaacgc
cagatggatgaagcggcaatttatactattcacggtttttgtcagcgaatgctggctaac
aatgcttttgaatcgggcatcttattcgaacaaaccttggtgcaagatgagctaccattg
cgcaggcaagcttgcgccgatttctggcggcgtcattgctatccgctcccgttggctatt
gccagagcggttagccaggagtggagtgggccagaggcattacttaaagatctttctgct
tacttacaaggtgaaacgccaaaatttcgacaagcgcctggtgatgatgaaacgatactc
agtcgacatcagcagatagtggtacaaattgaagccgttaaggcgcaatggcgcgccgct
gctccagagttagaggcgctgattagtgggtctggtgttgataaacgcagctacagtgcc
cgatatttacctaactggttggaaaaagttggtagctgggctgagcaggaaaccggcgat
tatcagttgccaaaagagttagagaaattccgccaatcagtactatttgaaaaaaccaaa
aagggtgaggctccccagcacgatgtcttccatactatagaccgtatattcgaacaacct
ctgacactcagagatctgattttagcccgagctatcagcgagatacgaatctctgtgcag
caagaaaaacgccagagggcagagctggggtttgatgatctgctcagtaaactggatgcg
gcattgcaacaagctggtggagaattgttggctcaatccattcgcactcgttatcccgta
gcaatgattgatgagtttcaagataccgacccgcaacaataccgaattttccacacactt
tatggtgggcaagaagagtgcggcctattactgattggtgaccctaaacaggctatttat
gcttttcgtggtgccgatatttttacttatattcgtgctcgctcagaagtaagtgcccac
tacacattagatactaactggcgctcatccttcccaatggtgcaatcagttaaccggctt
tttagtctagtcgatgttccttttttgtttaaacaaattccctttataaatgtggcgcct
gcgcaaaaaaataagcaattatcatttgaaataaaagggaaaaaacagccagctatgtct
ttttggttgcagtctggggacggtgttggggttagtgagtaccaacaattaatggcacgg
caatgtgccgcccaaatccgagactggcttactgctgggcaaaaaggtttggcacaatta
gtgacagccacaagttcaaggccggttcaggcgtcagatatcaccatattggtgcgtagc
cgggcagaggcggcactggtgcgcgatgccctgagtacattggcaatcccatccgtgtat
ctctccaaccgtgacagcgtatttgatactgcggaggccaaagatctgctgtggctatta
caggctgttttagctcccgagcaggagcgggcattacgcagcgctatggcgaccggcatc
ttggggctggatgcgcgaatgctggatgagttgaatcacgatgagcgggcttgggatgct
ttggttgatgagttcgatggttatcgccaacactggcagcgccgtggggtgctcccgatg
ctgcgggagattatggctcagcgccatttagctgagaatttgttggcaactcagggcggt
gaacggcggctaacagatttgctgcatttgggcgaattattgcaagaagcagcatcacag
cttgatagtgagcacgcacttatccgttggctggcgcaacaaatagcacaaccgaatcat
cagtctgataaccaacaacttcgtttggaaagtgatcgccatttggtgcaagtcattact
atccataaatccaaaggattggaatacccgctggtttggttaccttttgtgagcaatttc
cgccagcagcaagacgtgctttaccatgatcgccacagctttgaagcattactcgatctg
aatgctgatgaagaaagtcaggctttggcggaggaagaacgtctggctgaggacttacgg
ctattatacgtagcactcacccgtgcggtttatcattgcagcataggtattgccccgctg
attaaaggggggcgaaaaaaacagggtgaaagtgatatgcatctcagcgcgttaggctat
ctggtgcaacaaggtcaggcgggagatgcacaatatcttgctgataaattggcaggtttg
gcggcgctggcagatggagagatttctgtttcacaagccgggcaactggatgagacacct
tggcaaccgcagcaggatgagttgccagcccttgctgctcgccagtttagtcgccaaata
cacgatttttggcgggtcaccagctattccggcctacaacagcatggttcgagtaaaagc
gtagcctcacaggcgttgagtgtgccattacaggagttattaccacggttggatactgac
gctgttggcgagcaaacattaatgaccgagcctcagttaacccctcataccttcccccga
ggtgcggcacccggtactttcttgcatgatttacttgaacctctggatttcagccagccg
attgaacaagactggctgacagagcagctacagcaacaaggttttggtgagcagtggtca
tctatgctgtatcaatggctaacagacattgtacaaacccctctaaatgaaactggtgtg
acattggcgcaattgacaccacagagcaagcaagctgagctgcaattttatttgccgata
gacactttactgcaagcccgtgagctagataccttaatcaagcgctatgacccactctct
cgccagtgcccagtgttggattttcagcaagtcagaggaatgctgaaagggtttattgat
ctggttttctgctggcagggcaaatattacttactggattacaaatccaactggttgggt
gaggacagcagtgcctatacccacgatgcgatggcccaagccatggctgagcatcgttat
gacttgcaatatcagctttatactctggcattacaccgctatttgcgtcatcggttgagt
cattatgactatcagcgcgactttggtggtgtcatttatctcttcctgcgtggtgttgat
aaacagcatccggggaacggcatttttagctgccgccctgaacgagaactcattgagaga
atggactgtttattcagtggtggtgaagtagggccgcatattagtgacaacagtggtatg
gcgataaccggtgagggcacatcaatatga
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integrated database retrieval system
