Yersinia enterocolitica 2516-87: CH48_969
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Entry
CH48_969 CDS
T03644
Name
(GenBank) RNA pseudouridylate synthase family protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
yet
Yersinia enterocolitica 2516-87
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yet03009
]
CH48_969
03016 Transfer RNA biogenesis [BR:
yet03016
]
CH48_969
Enzymes [BR:
yet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CH48_969
5.4.99.29 23S rRNA pseudouridine746 synthase
CH48_969
Ribosome biogenesis [BR:
yet03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH48_969
Transfer RNA biogenesis [BR:
yet03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CH48_969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AJJ28907
UniProt:
A0A0E1NN57
LinkDB
All DBs
Position
1087672..1088262
Genome browser
AA seq
196 aa
AA seq
DB search
MVVNKASGLLSVPGRAPENKDSVMTRIQADFPSAESVHRLDMATSGVIVVALTKAAEREL
KRQFREREPKKSYVARVWGHLAQDEALIDLPLICDWPNRPKQKVCYETGKSSQTQYQVLS
RDADGSTRVKLSPITGRSHQLRVHMLAIGHPILGDGFYAHPEAKAMASRLQLHAQELCIT
HPEFGTVMHFKCEPEF
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcaataaagccagtggtttgctgtccgttccgggccgcgcgccagagaataaa
gatagcgtgatgacccgcattcaggccgatttcccgagcgcggaatctgtgcaccgatta
gatatggcgaccagtggcgtgattgtggtggcgctgactaaagcggcagagcgtgagtta
aagcggcaatttcgtgaacgcgagccgaaaaagtcttatgtggcgcgggtatggggccat
ttggcacaagatgaggccttgattgacttgcctttaatttgtgactggccgaatcggcca
aagcagaaagtgtgttatgaaaccggtaaatcctcgcaaactcagtatcaggtgctatca
cgggatgctgacggcagtacgcgagttaagctatcccccatcaccggccgctcacatcag
ttacgggttcatatgctggcgataggtcaccctattcttggtgatggcttctatgcccat
cccgaggctaaagcaatggcatcccggttacagttgcatgcgcaagaattatgtattact
catccggagtttgggacagtgatgcattttaaatgcgagccagaattttga
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