Yersinia enterocolitica WA: CH47_1005
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Entry
CH47_1005 CDS
T03643
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yew01002
]
CH47_1005
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yew01011
]
CH47_1005
Peptidases and inhibitors [BR:
yew01002
]
Cysteine peptidases
Family C82
CH47_1005
Peptidoglycan biosynthesis and degradation proteins [BR:
yew01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CH47_1005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJI83904
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Position
1071506..1073374
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AA seq
622 aa
AA seq
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MSVEKRNPQRAFALYCALICSLMPTFTVSATAPIMPVDLSSARSPASQSMSVAQSRSQLL
AVLPKNVTPFYSSELAVLYAANHMQPMWQDRAAVQHFQQQLAELALSGIQPQFMQWVKWL
SDPAITGLARDVILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVH
EGTTAPYLASLAPQHPQYEKMHQALKEMLADRRPWPQMANGPSLRPGQLSDDIPALREIL
DRTGMLHPVVSAPVQTPEVIPVDNPAVAVVNDDLSVDEEKSRAQAHSLVVSPSAAPVADT
PVTSGVVAPSSAPVTATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQT
RATLLALNIQRLRILPGRVDNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSS
ALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWSM
ISPNNFPYRLRQAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNK
ASDLANMLLQDAGWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDI
YNYDMTVRSGSQISHQAELLLQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagaaaaaagaaatccgcaacgcgcattcgcgttatattgcgctttaatctgt
agcttgatgcctacatttaccgtatcggccacagcacctatcatgcctgtagatttatcg
tcggcgcgctcacctgcatcgcaaagcatgtcggtggcccaaagccgttcccaattattg
gcggtattaccgaaaaacgttacgccgttctattcttctgaattggctgtgctttatgct
gcaaaccatatgcaacctatgtggcaagaccgggccgctgttcagcatttccagcaacaa
ttagcggaactggcactctccggtatccaaccacaatttatgcaatgggtgaaatggctg
agtgatccggccattaccggtttggcgcgcgacgttattttgtccgacgcgatgctgggc
tatttgcactttatctcaggtgtcggtgcgaatggcagtgtctggttgtacagcaatgtg
ccgtacaagatggcgatgccacctgctacgattttaaaccgttggcagcaggcggtgcat
gagggtactactgctccatatctggcgtccctggcacctcagcatcctcaatatgaaaaa
atgcatcaggcgctgaaagagatgctagccgaccgccgcccgtggccacaaatggccaat
ggcccgagtttacgcccaggccagctaagcgacgatatacctgctttacgggagattctc
gacagaaccggcatgttgcatccggttgtgtcagcgccggtacaaactccggaagtcatt
ccggttgataatccggcggtggcggtggtgaatgatgacctctccgtcgatgaagagaaa
agccgcgcccaggcccacagcctggtggttagtccatcagcggcacctgttgcagatacg
ccggtgaccagtggcgtggttgctccatcctctgcgccagtgacggctacagtgaccgac
aatgtctatacgccagagctaatggaggcagtcaaacgttttcaacgctggcatggtctg
agtgatgatggcgttatcggtgcccggacgcgtgagtggttgaatgtttctccgcagaca
agggcgacattgttagcattgaatattcagcgtttgcgcattttgccggggcgggtggat
aacggcatcatggttaacattccaaactattcgctgaattattataaaaatggcacacag
gtgctttcatcccgtgtgattgtgggtcgcccaagccgtaaaacaccattaatgagtagt
gcgctgaataatgtggtggtgaacccgccgtggaacgtgccgacctctctggtgcgtcag
gatatcgtgccgaaagcacgttacgattccagctatttccagcgtcatggctataccgtc
ttgtccggttggagtaatgatgctgaagtcgtcgatccttcgatgattgactggagcatg
atttcaccgaacaatttcccgtaccgcttgcgccaggcaccaggtgccagcaactccttg
gggcggttcaaattcaatatgccaagctcagatgcaatctatttgcatgacacgccgaac
catggcttgttccagaaagatatccgcgcgctgagctctggttgtgttcgggtgaataaa
gcctctgatttagccaatatgctgttgcaggatgccggctggaatgatgctcgggtatcc
tcgaccttgaaacaaggcgatactacttatgtcaacatccgccaacgcgtgccggtacaa
ctctattacctgacggcatgggtggctgatgacggtaaaccgcagtttagaacagatatt
tacaattatgatatgacggtgagatcaggttcacaaatctcccatcaagccgaacttttg
ctgcaataa
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